Evidence map›Paper›PMID 16543412›Full record

ArticlePlant physiology2006

Recruitment of novel calcium-binding proteins for root nodule symbiosis in Medicago truncatula.

Junqi Liu, Susan S Miller, Michelle Graham, Bruna Bucciarelli, Christina M Catalano, D Janine Sherrier, Deborah A Samac, Sergey Ivashuta, Maria Fedorova, Peter Matsumoto and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Calcium in the Life Cycle of Legume Root Nodules.Indian journal of microbiology · 2023
    Review
  3. Article
  4. Article
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  6. Genes · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Junqi LiuDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, Minnesota 55108, USA.
Susan S Miller
Michelle Graham
Bruna Bucciarelli
Christina M Catalano
D Janine Sherrier
Deborah A Samac
Sergey Ivashuta
Maria Fedorova
Peter Matsumoto
J Stephen Gantt
Carroll P Vance
United States Department of Agriculture · USUniversity of Minnesota · USUniversity of Delaware · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Legume rhizobia symbiotic nitrogen (N2) fixation plays a critical role in sustainable nitrogen management in agriculture and in the Earth's nitrogen cycle. Signaling between rhizobia and legumes initiates development of a unique plant organ, the root nodule, where bacteria undergo endocytosis and become surrounded by a plant membrane to form a symbiosome. Between this membrane and the encased bacteria exists a matrix-filled space (the symbiosome space) that is thought to contain a mixture of plant- and bacteria-derived proteins. Maintenance of the symbiosis state requires continuous communication between the plant and bacterial partners. Here, we show in the model legume Medicago truncatula that a novel family of six calmodulin-like proteins (CaMLs), expressed specifically in root nodules, are localized within the symbiosome space. All six nodule-specific CaML genes are clustered in the M. truncatula genome, along with two other nodule-specific genes, nodulin-22 and nodulin-25. Sequence comparisons and phylogenetic analysis suggest that an unequal recombination event occurred between nodulin-25 and a nearby calmodulin, which gave rise to the first CaML, and the gene family evolved by tandem duplication and divergence. The data provide striking evidence for the recruitment of a ubiquitous Ca(2+)-binding gene for symbiotic purposes.

Indexed as

Base SequenceCalciumCalcium-Binding ProteinsGenome, PlantGreen Fluorescent ProteinsMedicago truncatulaMolecular Sequence DataMultigene FamilyNitrogen FixationPhylogenyPlant ProteinsPlant RootsRecombinant Fusion ProteinsSequence AlignmentSymbiosisCalciumCalcium-Binding ProteinsGreen Fluorescent ProteinsPlant ProteinsRecombinant Fusion Proteins

Identifiers

PMID16543412
PMCPMC1459311
OpenAlexW2122406510

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.