Evidence map›Paper›PMID 16540691›Full record

ArticleRNA (New York, N.Y.)2006

Functional links between the Prp19-associated complex, U4/U6 biogenesis, and spliceosome recycling.

Chun-Hong Chen, Der-I Kao, Shih-Peng Chan, Tsu-Chung Kao, Jui-Yen Lin, Soo-Chen Cheng

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in RNA (New York, N.Y.), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

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  5. RNA Binding Proteins and Genome Integrity.International journal of molecular sciences · 2017
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  6. Roles of RNA-Binding Proteins in DNA Damage Response.International journal of molecular sciences · 2016
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  11. Decoding ubiquitin for mitosis.Genes & cancer · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chun-Hong ChenInstitute of Molecular Biology, Academia Sinica, Nankang, Taiwan, Republic of China.
Der-I Kao
Shih-Peng Chan
Tsu-Chung Kao
Jui-Yen Lin
Soo-Chen Cheng
Institute of Molecular Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Prp19-associated complex, consisting of at least eight protein components, is involved in spliceosome activation by specifying the interaction of U5 and U6 with pre-mRNA for their stable association with the spliceosome after U4 dissociation. We show here that yeast cells depleted of one or two of the Prp19-associated components, accumulate the free form of U4. In NTC25-deleted cells, the level of U6 was also reduced. Extracts prepared from NTC25-deleted cells contained neither free U4 nor U6 and were ineffective in spliceosome recycling in the in vitro splicing reaction. Overexpression of U6 partially rescued the temperature-sensitive growth defect and decreased the relative amount of free U4 in NTC25-deleted cells, indicating that the accumulation of free U4 was a consequence of insufficient amounts of U6 snRNA. Extracts prepared from U6-overproducing NTC25-deleted cells containing free-form U6 were capable of spliceosome recycling, suggesting a role of free U6 RNP in spliceosome recycling. Our results demonstrate that in addition to direct participation in spliceosome activation, the Prp19-associated complex has an indirect role in spliceosome recycling through affecting the biogenesis of U4/U6 snRNP in the in vivo splicing reaction.

Indexed as

Ribonucleoprotein, U4-U6 Small NuclearSpliceosomesBlotting, NorthernBlotting, WesternElectrophoresis, Polyacrylamide GelGene DeletionGenes, FungalModels, BiologicalPlasmidsRNA, MessengerRNA SplicingRNA Splicing FactorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsPRP19 protein, S cerevisiaeRibonucleoprotein, U4-U6 Small NuclearRNA, MessengerRNA Splicing FactorsSaccharomyces cerevisiae Proteins

Identifiers

PMID16540691
PMCPMC1440898
OpenAlexW2168875549

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.