Evidence map›Paper›PMID 16537598›Full record

ArticleJournal of virology2006

Competitive translation efficiency at the picornavirus type 1 internal ribosome entry site facilitated by viral cis and trans factors.

Elena Y Dobrikova, Rachel N Grisham, Constanze Kaiser, Jennifer Lin, Matthias Gromeier

Abstract readComparative Study
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Polio virotherapy provokes MDA5 signaling and CD4Microbiology and molecular biology reviews : MMBR · 2025
    Review
  3. Article
  4. Article
  5. Enterovirus 2AmBio · 2021
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Viral strategies to subvert the mammalian translation machinery.Progress in molecular biology and translational science · 2009
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elena Y DobrikovaDepartment of Molecular Genetics & Microbiology, Duke University Medical Center, Durham, NC 27710, USA.
Rachel N Grisham
Constanze Kaiser
Jennifer Lin
Matthias Gromeier

Funding

Cell Type-Specific Viral Translation in the CNSR01CA087537 · NCI · DUKE UNIVERSITY · PI GROMEIER, MATTHIAS · 2002 to 2006
$1.2M
Cell Type Specific Viral Translation in the CNSR55CA087537 · NCI · DUKE UNIVERSITY · PI GROMEIER, MATTHIAS · 2001 to 2001
$100k
NCI NIH HHS CA87537NCI NIH HHS R01 CA087537NCI NIH HHS R55 CA087537
6 · The paper itself

Abstract

Enteroviruses (EVs) overcome their host cells by usurping the translation machinery to benefit viral gene expression. This is accomplished through alternative translation initiation in a cap-independent manner at the viral internal ribosomal entry site (IRES). We have investigated the role of cis- and trans-acting viral factors in EV IRES translation in living cells. We observed that considerable portions of the viral genome, including the 5'-proximal open reading frame and the 3' untranslated region, contribute to stimulation of IRES-mediated translation. With the IRES in proper context, translation via internal initiation in uninfected cells is as efficient as at capped messages with short, unstructured 5' untranslated regions. IRES function is enhanced in cells infected with the EV coxsackievirus B3, but the related poliovirus has no significant stimulatory activity. This differential is due to the inherent properties of their 2A protease and is not coupled to 2A-mediated proteolytic degradation of the eukaryotic initiation factor 4G. Our results suggest that the efficiency of alternative translation initiation at EV IRESs depends on a properly configured template rather than on targeted alterations of the host cell translation machinery.

Indexed as

Protein BiosynthesisRNA, Viral3' Untranslated RegionsEnterovirus InfectionsHeLa CellsHumansLuciferasesOpen Reading FramesPicornaviridaeRibosomesRNA, Messenger3' Untranslated RegionsLuciferasesRNA, MessengerRNA, Viral

Identifiers

PMID16537598
PMCPMC1440366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.