Evidence map›Paper›PMID 16537433›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

The Phycomyces madA gene encodes a blue-light photoreceptor for phototropism and other light responses.

Alexander Idnurm, Julio Rodríguez-Romero, Luis M Corrochano, Catalina Sanz, Enrique A Iturriaga, Arturo P Eslava, Joseph Heitman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 130 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Strategies for Controlling the Sporulation inJournal of fungi (Basel, Switzerland) · 2022
    Review
  8. Article
  9. Article
  10. Structure prediction and function characterization of WC-2 proteins in Blakeslea trispora.International microbiology : the official journal of the Spanish Society for Microbiology · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. The Blue-Light PhotoreceptorApplied and environmental microbiology · 2019
    Article
  16. Article
  17. Light sensing and responses in fungi.Nature reviews. Microbiology · 2019
    Review
  18. Mystique ofJournal of genetics · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Alexander IdnurmDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC 27710, USA.
Julio Rodríguez-Romero
Luis M Corrochano
Catalina Sanz
Enrique A Iturriaga
Arturo P Eslava
Joseph Heitman
Universidad de Salamanca · ESUniversidad de Sevilla · ESDuke University · USDuke University Hospital · US

Funding

ROLE OF CALCINEURIN IN C. NEOFORMANS MATING AND FRUITINGR01AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 1997 to 2025
$6.7M
Genetics of Cryptococcus sexual reproductionR37AI039115 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH · 2011 to 2020
$4.9M
NIAID NIH HHS AI 39115NIAID NIH HHS R01 AI039115NIAID NIH HHS R37 AI039115
6 · The paper itself

Abstract

Phycomyces blakesleeanus is a filamentous zygomycete fungus that produces striking elongated single cells that extend up to 10 cm into the air, with each such sporangiophore supporting a sphere containing the spores for dispersal. This organism has served as a model for the detection of environmental signals as diverse as light, chemicals, touch, wind, gravity, and adjacent objects. In particular, sporangiophore growth is regulated by light, and it exhibits phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses. The Phycomyces madA mutants were first isolated more than 40 years ago, and they exhibit reduced sensitivity to light. Here, we identify two (duplicated) homologs in the White Collar 1 family of blue-light photoreceptors in Phycomyces. We describe that the madA mutant strains contain point mutations in one of these genes and that these mutations cosegregate with a defect in phototropism after genetic crosses. Thus, the phototropic responses of fungi through madA and plants through phototropin rely on diverse proteins; however, these proteins share a conserved flavin-binding domain for photon detection.

Indexed as

Base SequenceCryptochromesDNA-Binding ProteinsFlavoproteinsFungal ProteinsGenes, DuplicateLightMolecular Sequence DataMutationPhotoreceptor CellsPhototropismPhycomycesTranscription FactorsTranscription, GeneticCryptochromesDNA-Binding ProteinsFlavoproteinsFungal ProteinsTranscription Factorswc-1 protein, Neurospora crassa

Identifiers

PMID16537433
PMCPMC1450208
OpenAlexW2141327675

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.