Evidence map›Paper›PMID 16536504›Full record

ArticleJournal of the American Chemical Society2006

An alpha-helical peptidomimetic inhibitor of the HIV-1 Rev-RRE interaction.

Nicholas L Mills, Matthew D Daugherty, Alan D Frankel, R Kiplin Guy

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 52 citations in OpenAlex.

  1. An Encodable Scaffold for Sequence-Specific Recognition of Duplex RNA.Angewandte Chemie (International ed. in English) · 2023
    Article
  2. RNA-Binding Macrocyclic Peptides.Frontiers in molecular biosciences · 2022
    Review
  3. HIV Rev-isited.Open biology · 2020
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Synthetic Peptides as Protein Mimics.Frontiers in bioengineering and biotechnology · 2015
    Review
  13. Targeting the HIV RNA genome: high-hanging fruit only needs a longer ladder.Current topics in microbiology and immunology · 2015
    Review
  14. Potential pharmacological chaperones targeting cancer-associated MCL-1 and Parkinson disease-associated α-synuclein.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nicholas L MillsDepartment of Biochemistry and Biophysics, University of California, San Francisco, California 94143-2280, USA.
Matthew D Daugherty
Alan D Frankel
R Kiplin Guy
University of California, San Francisco · US

Funding

Structure Biology and Targeted Drug Design for AIDSP01GM056531 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ORTIZ DE MONTELLANO, PAUL R · 1997 to 2006
$11.0M
NIGMS NIH HHS GM 56531NIGMS NIH HHS P01 GM056531
6 · The paper itself

Abstract

The interaction between the HIV-1 Rev protein and the Rev-Responsive Element (RRE) RNA is an attractive target for anti-viral therapy. We have designed alpha-helical peptidomimetics of Rev-like peptides using side chain-side chain macrolactam formation between positions i and i+4. One peptidomimetic having an appropriate location, orientation, and length of the macrolactam exhibited both significant helical character and specific RRE binding. This molecule displays 2-fold greater RNA specificity than the wild-type Rev peptide and more than 20-fold greater specificity than an uncyclized control peptide. Thus, specific, high affinity recognition of the RRE is feasible utilizing a small, relatively rigid peptidomimetic scaffold.

Indexed as

Genes, envAmino Acid SequenceAnti-HIV AgentsBiomimetic MaterialsCircular DichroismGene Products, revHIV-1Molecular Sequence DataOligopeptidesProtein Structure, Secondaryrev Gene Products, Human Immunodeficiency VirusRNA, ViralAnti-HIV AgentsGene Products, revOligopeptidesrev Gene Products, Human Immunodeficiency VirusRNA, Viral

Identifiers

PMID16536504
PMCPMC2566309
OpenAlexW1979166729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.