Evidence map›Paper›PMID 16534506›Full record

ArticleMolecular psychiatry2006

Genomewide linkage study in the Irish affected sib pair study of alcohol dependence: evidence for a susceptibility region for symptoms of alcohol dependence on chromosome 4.

C A Prescott, P F Sullivan, P-H Kuo, B T Webb, J Vittum, D G Patterson, D L Thiselton, J M Myers, M Devitt, L J Halberstadt and 6 more

Abstract read
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In one paragraph

Article in Molecular psychiatry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 110 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Analysis of Rare Variants in the Alcohol Dependence Candidate Gene GATA4.Alcoholism, clinical and experimental research · 2016
    Article
  6. Article
  7. Article
  8. Genetics and genomics of alcohol sensitivity.Molecular genetics and genomics : MGG · 2014
    Review
  9. Novel QTL at chromosome 6p22 for alcohol consumption: Implications for the genetic liability of alcohol use disorders.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2014
    Article
  10. Family-based association analysis of alcohol dependence criteria and severity.Alcoholism, clinical and experimental research · 2014
    Article
  11. Article
  12. Review
  13. Review
  14. Clinical indices of familial alcohol use disorder.Alcoholism, clinical and experimental research · 2012
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

C A PrescottDepartment of Psychology, Virginia Institute for Psychiatric and Behavioral Genetics, Virginia Commonwealth University, USA. cprescot@usc.edu
P F Sullivan
P-H Kuo
B T Webb
J Vittum
D G Patterson
D L Thiselton
J M Myers
M Devitt
L J Halberstadt
V P Robinson
M C Neale
E J van den Oord
D Walsh
B P Riley
K S Kendler
Virginia Commonwealth University · USHealth Research Board · IEUniversity of North Carolina at Chapel Hill · USUniversity of Southern California · USUniversity of Ulster · GB

Funding

IRISH AFFECTED SIB PAIR STUDY OF ALCOHOL DEPENDENCER01AA011408 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI KENDLER, KENNETH SEEDMAN · 1997 to 2005
$3.4M
NIAAA NIH HHS R01-AA-11408
6 · The paper itself

Abstract

Alcoholism is a relatively common, chronic, disabling and often treatment-resistant disorder. Evidence from twin and adoption studies indicates a substantial genetic influence, with heritability estimates of 50-60%. We conducted a genome scan in the Irish Affected Sib Pair Study of Alcohol Dependence (IASPSAD). Most probands were ascertained through alcoholism treatment settings and were severely affected. Probands, affected siblings and parents were evaluated by structured interview. A 4 cM genome scan was conducted using 474 families of which most (96%) were comprised by affected sib pairs. Nonparametric and quantitative linkage analyses were conducted using DSM-IV alcohol dependence (AD) and number of DSM-IV AD symptoms (ADSX). Quantitative results indicate strong linkage for number of AD criteria to a broad region of chromosome 4, ranging from 4q22 to 4q32 (peak multipoint LOD=4.59, P=2.1 x 10(-6), at D4S1611). Follow-up analyses suggest that the linkage may be due to variation in the symptoms of tolerance and out of control drinking. There was evidence of weak linkage (LODs of 1.0-2.0) to several other regions, including 1q44, 13q31, and 22q11 for AD along with 2q37, 9q21, 9q34 and 18p11 for ADSX. The location of the chromosome 4 peak is consistent with results from prior linkage studies and includes the alcohol dehydrogenase gene cluster. The results of this study suggest the importance of genetic variation in chromosome 4 in the etiology and severity of alcoholism in Caucasian populations.

Indexed as

Genetic Predisposition to DiseaseAgedAlcohol-Related DisordersChromosomes, Human, Pair 4FemaleGenetic LinkageHumansLod ScoreMaleMiddle AgedPedigreeSiblingsStatistics, Nonparametric

Identifiers

PMID16534506
OpenAlexW2084349225

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.