Evidence map›Paper›PMID 16533896›Full record

ArticleThe Journal of general physiology2006

Functional roles of charged amino acid residues on the wall of the cytoplasmic pore of Kir2.1.

Yuichiro Fujiwara, Yoshihiro Kubo

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Article in The Journal of general physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

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0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

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  10. Polyamines and potassium channels: A 25-year romance.The Journal of biological chemistry · 2018
    Review
  11. External KThe Journal of general physiology · 2018
    Article
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  18. Review
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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Yuichiro FujiwaraDivision of Biophysics and Neurobiology, Department of Molecular Physiology, National Institute for Physiological Sciences, Aichi, Japan.yuichiro@nips.ac.jp
Yoshihiro Kubo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is known that rectification of currents through the inward rectifier K(+) channel (Kir) is mainly due to blockade of the outward current by cytoplasmic Mg(2+) and polyamines. Analyses of the crystal structure of the cytoplasmic region of Kir2.1 have revealed the presence of both negatively (E224, D255, D259, and E299) and positively (R228 and R260) charged residues on the wall of the cytoplasmic pore of Kir2.1, but the detail is not known about the contribution of these charged residues, the positive charges in particular, to the inward rectification. We therefore analyzed the functional significance of these charged amino acids using single/double point mutants in order to better understand the structure-based mechanism underlying inward rectification of Kir2.1 currents. As a first step, we used two-electrode voltage clamp to examine inward rectification in systematically prepared mutants in which one or two negatively or positively charged amino acids were neutralized by substitution. We found that the intensity of the inward rectification tended to be determined by the net negative charge within the cytoplasmic pore. We then used inside-out excised patch clamp recording to analyze the effect of the mutations on blockade by intracellular blockers and on K(+) permeation. We observed that a decrease in the net negative charge within the cytoplasmic pore reduced both the susceptibility of the channel to blockade by Mg(2+) or spermine and the voltage dependence of the blockade. It also reduced K(+) permeation; i.e., it decreased single channel conductance, increased open-channel noise, and strengthened the intrinsic inward rectification in the total absence of cytoplasmic blockers. Taken together, these data suggest that the negatively charged cytoplasmic pore of Kir electrostatically gathers cations such as Mg(2+), spermine, and K(+) so that the transmembrane pore is sufficiently filled with K(+) ions, which enables strong voltage-dependent blockade with adequate outward K(+) conductance.

Indexed as

Amino AcidsAmino Acid SequenceAnimalsCell LineCytoplasmElectric ConductivityHistidineHumansMagnesiumMembrane PotentialsMolecular Sequence DataPatch-Clamp TechniquesPoint MutationPotassium Channels, Inwardly RectifyingProtein Structure, QuaternarySpermineAmino AcidsHistidineKCNJ2 protein, humanMagnesiumPotassium Channels, Inwardly RectifyingSpermine

Identifiers

PMID16533896
PMCPMC2151513

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.