Evidence map›Paper›PMID 16533882›Full record

ArticleThe Journal of experimental medicine2006

Roles for HLA and KIR polymorphisms in natural killer cell repertoire selection and modulation of effector function.

Makoto Yawata, Nobuyo Yawata, Monia Draghi, Ann-Margaret Little, Fotini Partheniou, Peter Parham

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 260 papers.

0numbers the graph read from it
0cells of the map it votes in
260citing papers in PubMed
16.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

260 citing papers in PubMed, 523 citations in OpenAlex.

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  17. Frontiers in genetics · 2025
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200 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Makoto YawataDepartment of Structural Biology, School of Medicine, Stanford University, Stanford, CA 94305, USA, and Department of Haematology, The Royal Free Hospital, London, UK. myawata@stanford.edu
Nobuyo Yawata
Monia Draghi
Ann-Margaret Little
Fotini Partheniou
Peter Parham
Stanford University · USAnthony Nolan · GB

Funding

STRUCTURAL BIOLOGY OF HLA-A,B ANTIGENSR01AI017892 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1985 to 2019
$6.1M
INTERACTIONS BETWEEN HLA CLASS I &CYTOLYTIC LYMPHOCYTESR01AI022039 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1985 to 2017
$5.2M
STRUCTURAL BIOLOGY OF HLA-A/B ANTIGENSR37AI017892 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1989 to 1998
–
NIAID NIH HHS AI-017892NIAID NIH HHS AI-022039NIAID NIH HHS R01 AI017892NIAID NIH HHS R01 AI022039
6 · The paper itself

Abstract

Interactions between killer cell immunoglobulin-like receptors (KIRs) and human leukocyte antigen (HLA) class I ligands regulate the development and response of human natural killer (NK) cells. Natural selection drove an allele-level group A KIR haplotype and the HLA-C1 ligand to unusually high frequency in the Japanese, who provide a particularly informative population for investigating the mechanisms by which KIR and HLA polymorphism influence NK cell repertoire and function. HLA class I ligands increase the frequencies of NK cells expressing cognate KIR, an effect modified by gene dose, KIR polymorphism, and the presence of other cognate ligand-receptor pairs. The five common Japanese KIR3DLI allotypes have distinguishable inhibitory capacity, frequency of cellular expression, and level of cell surface expression as measured by antibody binding. Although KIR haplotypes encoding 3DL1*001 or 3DL1*005, the strongest inhibitors, have no activating KIR, the dominant haplotype encodes a moderate inhibitor, 3DL1*01502, plus functional forms of the activating receptors 2DL4 and 2DS4. In the population, certain combinations of KIR and HLA class I ligand are overrepresented or underrepresented in women, but not men, and thus influence female fitness and survival. These findings show how KIR-HLA interactions shape the genetic and phenotypic KIR repertoires for both individual humans and the population.

Indexed as

FemaleGene Expression RegulationGenetics, PopulationHaplotypesHLA-C AntigensHumansJapanKiller Cells, NaturalLymphocyte ActivationMalePolymorphism, GeneticReceptors, ImmunologicReceptors, KIRReceptors, KIR2DL4Receptors, KIR3DL1Sex FactorsHLA-C AntigensReceptors, ImmunologicReceptors, KIRReceptors, KIR2DL4Receptors, KIR3DL1

Identifiers

PMID16533882
PMCPMC2118260
OpenAlexW2159823147

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.