Evidence map›Paper›PMID 16528562›Full record

ArticlePlant cell reports2006

A comprehensive expression analysis of the WRKY gene superfamily in rice plants during defense response.

Hak-Seung Ryu, Muho Han, Sang-Kyu Lee, Jung-Il Cho, Nayeon Ryoo, Sunggi Heu, Youn-Hyung Lee, Seong Hee Bhoo, Guo-Liang Wang, Tae-Ryong Hahn and 1 more

Abstract read
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In one paragraph

Article in Plant cell reports, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 291 citations in OpenAlex.

  1. Augmenting riceProceedings of the National Academy of Sciences of the United States of America · 2025
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  2. Characteristics and Expression Profiles of IdentifiedInternational journal of molecular sciences · 2025
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  3. Genome-wide characterization ofFrontiers in plant science · 2025
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  16. Sucrose preferentially promotes expression ofFrontiers in plant science · 2023
    Article
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  19. Early wound-responsive cues regulate the expression of WRKY family genes in chickpea differently under wounded and unwounded conditions.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  20. Genotype and Phenotype Interaction betweenPlants (Basel, Switzerland) · 2022
    Article

62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Hak-Seung RyuGraduate School of Biotechnology & Plant Metabolism Research Center, Kyung Hee University, Yongin, 449-701, Korea.
Muho Han
Sang-Kyu Lee
Jung-Il Cho
Nayeon Ryoo
Sunggi Heu
Youn-Hyung Lee
Seong Hee Bhoo
Guo-Liang Wang
Tae-Ryong Hahn
Jong-Seong Jeon
Kyung Hee University · KRNational Institute of Agricultural Science and Technology · KRThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand the transcriptional regulatory mechanism of host genes during the activation of defense responses in rice, we isolated WRKY transcription factors whose expressions were altered upon attack of the fungal pathogen Magnaporthe grisea, the causal agent of the devastating rice blast disease. A systematic expression analysis of OsWRKYs (Oryza sativa L. WRKYs) revealed that among 45 tested genes the expression of 15 genes was increased remarkably in an incompatible interaction between rice and M. grisea. Twelve of the M. grisea-inducible OsWRKY genes were also differentially regulated in rice plants infected with the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo). In experiments with defense signaling molecules, the expression of two genes, OsWRKY45 and OsWRKY62, was increased in salicylic acid (SA)-treated leaves and the expression of three genes, OsWRKY10, OsWRKY82, and OsWRKY85 was increased by jasmonic acid (JA) treatment. OsWRKY30 and OsWRKY83 responded to both SA- and JA treatments. The expression profiles suggest that a large number of WRKY DNA-binding proteins are involved in the transcriptional activation of defense-related genes in response to rice pathogens.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantBlotting, NorthernCloning, MolecularCyclopentanesDNA, ComplementaryGenes, PlantHost-Parasite InteractionsMagnaportheMultigene FamilyOryzaOxylipinsPhylogenyPlant DiseasesRNA, MessengerSalicylic AcidCyclopentanesDNA, Complementaryjasmonic acidOxylipinsRNA, MessengerSalicylic Acid

Identifiers

PMID16528562
OpenAlexW1991489237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.