Evidence map›Paper›PMID 16520463›Full record

Trial reportJournal of clinical oncology : official journal of the American Society of Clinical Oncology2006

Single nucleotide polymorphisms of RecQ1, RAD54L, and ATM genes are associated with reduced survival of pancreatic cancer.

Donghui Li, Marsha Frazier, Douglas B Evans, Kenneth R Hess, Christopher H Crane, Li Jiao, James L Abbruzzese

Abstract readClinical Trial
In one paragraph

Trial report in Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Lack of association of XRCC1 rs1799782 genetic polymorphism with risk of pancreatic cancer: a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  3. Pooled it
  4. Trial
  5. Trial
  6. Trial
  7. Single-nucleotide polymorphisms of DNA damage response genes are associated with overall survival in patients with pancreatic cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2008
    Trial
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. RecQ Helicase Somatic Alterations in Cancer.Frontiers in molecular biosciences · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. RecQ DNA Helicase Rqh1 Promotes Rad3Molecular and cellular biology · 2020
    Article
  18. Aging · 2020
    Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Donghui LiDepartment of Gastrointestinal Medical Oncology-Unit 426, The University of Texas M.D. Anderson Cancer Center, Houston, TX 77230-1402, USA. dli@mdanderson.org
Marsha Frazier
Douglas B Evans
Kenneth R Hess
Christopher H Crane
Li Jiao
James L Abbruzzese

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Jared Kyle Burks · 1985 to 2026
$290.8M
SPORE in Pancreatic CancerP20CA101936 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ABBRUZZESE, JAMES L. · 2003 to 2009
$5.4M
Molecular Epidemiology of Pancreatic CancerR01CA098380 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LI, DONGHUI · 2004 to 2008
$2.6M
GENETIC SUSCEPTIBILITY--CARCINOGENS IN PANCREATIC CANCERR03CA084581 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI LI, DONGHUI · 2000 to 2001
$151k
NCI NIH HHS CA16672NCI NIH HHS P20 CA101936NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA098380NCI NIH HHS R03 CA084581
6 · The paper itself

Abstract

purposeOur goal was to determine whether single nucleotide polymorphisms (SNPs) in DNA repair genes influence the clinical outcome of pancreatic cancer. PATIENTS AND

methodsWe evaluated 13 SNPs of eight DNA damage response and repair genes in 92 patients with potentially resectable pancreatic adenocarcinoma. All patients were treated with neoadjuvant concurrent gemcitabine and radiotherapy with or without a component of induction gemcitabine/cisplatin at The University of Texas M.D. Anderson Cancer Center (Houston, TX) from February 1999 to August 2004 and observed through August 2005. Response to the pretreatment was assessed by evaluating time to tumor progression and overall survival. Kaplan-Meier plot, log-rank test, and Cox regression were used to compare survival of patients according to genotype.

resultsThe RecQ1 A159C, RAD54L C157T, XRCC1 R194W, and ATM T77C genotypes had a significant effect on the overall survival with log-rank P values of .001, .004, .001, and .02, respectively. A strong combined effect of the four genotypes was observed. Patients with none of the adverse genotypes had a mean survival time of 62.1 months, and those with one, two, or three or more at-risk alleles had median survival times of 27.5, 14.4, and 9.9 months, respectively (log-rank P < .001). There is a significant interaction between the RecQ1 gene and other genotypes. All four genes except XRCC1 remained as independent predictors of survival in multivariate Cox regression models adjusted for other clinical predictors.

conclusionThese observations support the hypothesis that polymorphic variants of DNA repair genes affect clinical prognosis of patients with pancreatic cancer.

Indexed as

Adenosine TriphosphatasesAdultAgedAntimetabolites, AntineoplasticAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsDeoxycytidineDNA-Binding ProteinsDNA HelicasesDNA RepairFemaleGemcitabineGenotypeHumansMaleMiddle AgedAdenosine TriphosphatasesAntimetabolites, AntineoplasticAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDeoxycytidineDNA-Binding ProteinsDNA HelicasesGemcitabineNuclear ProteinsProtein Serine-Threonine KinasesRAD54L protein, humanRecQ HelicasesRECQL protein, humanTumor Suppressor Proteins

Identifiers

PMID16520463
PMCPMC1435378

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.