Evidence map›Paper›PMID 16513844›Full record

ArticleNucleic acids research2006

Post-transcriptional regulation of thioredoxin by the stress inducible heterogenous ribonucleoprotein A18.

Ruiqing Yang, David J Weber, France Carrier

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. DNA repair and anti-cancer mechanisms in the long-lived bowhead whale.bioRxiv : the preprint server for biology · 2024
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  9. Biomolecular NMR assignments · 2023
    Article
  10. Article
  11. Review
  12. Glucose-6-Phosphate Dehydrogenase, Redox Homeostasis and Embryogenesis.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ruiqing YangDepartment of Biochemistry and Molecular Biology, School of Medicine, University of Maryland Baltimore Baltimore, MD 21207, USA.
David J Weber
France Carrier
University of Maryland, Baltimore · US

Funding

The Structure and Function of S100 ProteinsR01GM058888 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI WEBER, DAVID JOSEPH · 1999 to 2010
$3.4M
800 MHZ NMR SPECTROMETERS10RR015741 · NCRR · UNIVERSITY OF MARYLAND BALTIMORE · PI WEBER, DAVID JOSEPH · 2001 to 2001
$500k
Cryoprobe for a 600 Mhz NMR spectrometerS10RR016812 · NCRR · UNIVERSITY OF MARYLAND BALTIMORE · PI WEBER, DAVID JOSEPH · 2002 to 2002
$231k
NIGMS NIH HHS GM58888NIGMS NIH HHS R01 GM058888
6 · The paper itself

Abstract

Thioredoxin (TRX) is a key protein of the cellular redox metabolism, which expression is increased in several tumors especially gastric tumors. Even though ultraviolet (UV) and hypoxia specifically induce TRX, the mechanisms that lead to increased TRX levels are still ill defined. Here, we show that the heterogenous ribonucleoprotein A18 (hnRNP A18) RNA Binding Domain (RBD) and the arginine, glycine (RGG) rich domain can bind TRX 3'-untranslated region (3'-UTR) independently but both domains are required for maximal binding. Immunoprecipitation (IP) of hnRNP A18-mRNAs complexes and co-localization of hnRNP A18 and TRX transcripts on ribosomal fractions confirm the interaction of hnRNP A18 with TRX transcripts in cells. Moreover, down regulation of hnRNP A18 correlates with a significant reduction of TRX protein levels. In addition, hnRNP A18 increases TRX translation and interacts with the eukaryotic Initiation Factor 4G (eIF4G), a component of the general translational machinery. Furthermore, hnRNP A18 phosphorylation by the hypoxia inducible GSK3beta increases hnRNP A18 RNA binding activity in vitro and in RKO cells in response to UV radiation. These data support a regulatory role for hnRNP A18 in TRX post-transcriptional expression possibly through a kissing loop model bridging TRX 3'- and 5'-UTRs through eIF4G.

Indexed as

Gene Expression RegulationProtein Biosynthesis3' Untranslated RegionsBinding SitesCell Line, TumorEukaryotic Initiation Factor-4GGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHeterogeneous-Nuclear RibonucleoproteinsHumansPhosphorylationProtein Structure, TertiaryRibosomesRNA, MessengerThioredoxinsUltraviolet Rays3' Untranslated RegionsEukaryotic Initiation Factor-4GGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaGSK3B protein, humanHeterogeneous-Nuclear RibonucleoproteinsRNA, MessengerThioredoxins

Identifiers

PMID16513844
PMCPMC1388095
OpenAlexW2109590319

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.