Evidence map›Paper›PMID 16513790›Full record

ArticleBiophysical journal2006

Base of pore loop is important for rectification, activation, permeation, and block of Kir3.1/Kir3.4.

S M Y Makary, T W Claydon, K M Dibb, M R Boyett

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Comparison of KHandbook of experimental pharmacology · 2021
    Article
  2. Cardiac strong inward rectifier potassium channels.Journal of molecular and cellular cardiology · 2010
    Review
  3. Article
  4. Article
  5. Article
  6. Electrostatic interactions in the channel cavity as an important determinant of potassium channel selectivity.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

S M Y MakaryDivision of Cardiovascular and Endocrine Sciences, University of Manchester, 46 Grafton Street, Manchester M13 9NT, United Kingdom.
T W Claydon
K M Dibb
M R Boyett
University of Manchester · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Kir3.1/Kir3.4 channel is an inward rectifier, agonist-activated K(+) channel. The location of the binding site within the channel pore that coordinates polyamines (and is thus responsible for inward rectification) and the location of the gate that opens the channel in response to agonist activation is unclear. In this study, we show, not surprisingly, that mutation of residues at the base of the selectivity filter in the pore loop and second transmembrane domain weakens Cs(+) block and decreases selectivity (as measured by Rb(+) and spermine permeation). However, unexpectedly, the mutations also weaken inward rectification and abolish agonist activation of the channel. In the wild-type channel and 34 mutant channels, there are significant (p < 0.05) correlations among the K(D) for Cs(+) block, Rb(+) and spermine permeation, inward rectification, and agonist activation. The significance of these findings is discussed. One possible conclusion is that the selectivity filter is responsible for inward rectification and agonist activation as well as permeation and block.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCesiumG Protein-Coupled Inwardly-Rectifying Potassium ChannelsIn Vitro TechniquesIon Channel GatingModels, MolecularMolecular Sequence DataMutationOocytesPatch-Clamp TechniquesProtein ConformationRubidiumSpermineXenopusCesiumG Protein-Coupled Inwardly-Rectifying Potassium ChannelsRubidiumSpermine

Identifiers

PMID16513790
PMCPMC1459495
OpenAlexW2147119933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.