Evidence map›Paper›PMID 1651175›Full record

ArticleCurrent genetics1991

Genomic organization and sequence analysis of the cytochrome oxidase subunit II gene from normal and male-sterile mitochondria in sugar beet.

M Senda, T Harada, T Mikami, M Sugiura, T Kinoshita

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Current genetics, 1991. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
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  11. Mitochondrial gene variation and phylogenetic relationships in the genus Beta.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1995
    Article
  12. Article
  13. Article
  14. The use of mitochondrial DNA polymorphism in the classification of individual onion plants by cytoplasmic genotypes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1993
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Organelle DNA polymorphism in apple cultivars and rootstocks.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1992
    Article
  20. The coxII gene in carrot mitochondria contains two introns.Molecular & general genetics : MGG · 1992
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

M SendaPlant Breeding Institute, Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
T Harada
T Mikami
M Sugiura
T Kinoshita

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have cloned and sequenced the cytochrome oxidase subunit II (coxII) gene from both normal and cytoplasmic male-sterile (CMS) sugar beet. The normal coxII (designated NcoxII) locus was found to be located 1491 bp upstream from the gene for cytochrome oxidase subunit I (coxI) on the same DNA strand and to have a 1463 bp intron which split the coding sequence into two exons (382 and 398 bp). The COXII protein contains 260 amino acid residues. We have also found two copies of the coxII gene (ScoxII-1 and ScoxII-2) to be present in the CMS genome. Our results suggest that the NcoxII gene diverges completely from the ScoxII-1 and ScoxII-2 genes 50 bp 5' to the ATG start codon. In addition, the ScoxII-1 and ScoxII-2 sequences could be readily discriminated from each other by the 3' end and the immediately adjacent flanking sequences of the gene: the 3' divergence results in a 101 codon extension of the ScoxII-2 ORF. Northern blot analysis demonstrates that the coxII gene exhibits altered transcript patterns in CMS compared with normal sugar beet. Different genomic arrangements of the coxII gene are considered to be the result of extensive intra- and inter-molecular recombination events involving the repeated DNA elements in the mitochondrial genome.

Indexed as

Genes, PlantAmino Acid SequenceBase SequenceBlotting, NorthernDatabases, FactualDNAElectron Transport Complex IVExonsGene LibraryMacromolecular SubstancesMolecular Sequence DataPlant Physiological PhenomenaPlantsReproductionRestriction MappingSequence Homology, Nucleic AcidDNAElectron Transport Complex IVMacromolecular Substances

Identifiers

PMID1651175

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.