Evidence map›Paper›PMID 16511251›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2006

Expression, purification, crystallization and preliminary X-ray analysis of the olfactomedin domain from the sea urchin cell-adhesion protein amassin.

Brian J Hillier, Vidyasankar Sundaresan, C David Stout, Victor D Vacquier

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Brian J HillierCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093-0202, USA. bhillier@ucsd.edu
Vidyasankar Sundaresan
C David Stout
Victor D Vacquier

Funding

STRUCTURAL STUDIES OF FIV PROTEASE INHIBITOR COMPLEXESP01GM048870 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI OLSON, ARTHUR J. · 1992 to 2007
$10.3M
NIGMS NIH HHS GM48870NIGMS NIH HHS P01 GM048870
6 · The paper itself

Abstract

A family of animal proteins is emerging which contain a conserved protein motif known as an olfactomedin (OLF) domain. Novel extracellular protein-protein interactions occur through this domain. The OLF-family member amassin, from the sea urchin Strongylocentrotus purpuratus, has previously been identified to mediate a rapid cell-adhesion event resulting in a large aggregation of coelomocytes, the circulating immune cells. In this work, heterologous expression and purification of the OLF domain from amassin was carried out and initial crystallization trials were performed. A native data set has been collected, extending to 2.7 A under preliminary cryoconditions, using an in-house generator. This work leads the way to the determination of the first structure of an OLF domain.

Indexed as

AnimalsCell Adhesion MoleculesCrystallizationCrystallography, X-RayEscherichia coliExtracellular Matrix ProteinsGlycoproteinsProtein Structure, TertiaryRecombinant ProteinsStrongylocentrotus purpuratusCell Adhesion MoleculesExtracellular Matrix ProteinsGlycoproteinsolfactomedinRecombinant Proteins

Identifiers

PMID16511251
PMCPMC2150939

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.