Evidence map›Paper›PMID 16511092›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2005

Structure of Citrobacter freundii L-methionine gamma-lyase.

D V Mamaeva, E A Morozova, A D Nikulin, S V Revtovich, S V Nikonov, M B Garber, T V Demidkina

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Structure of methionine γ-lyase from Clostridium sporogenes.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
  8. Article
  9. Review
  10. Article
  11. Expression, purification and preliminary crystallographic analysis of O-acetylhomoserine sulfhydrylase from Mycobacterium tuberculosis.Acta crystallographica. Section F, Structural biology and crystallization communications · 2011
    Article
  12. Origin of the allyl group in FK506 biosynthesis.The Journal of biological chemistry · 2010
    Article
  13. Crystallization and preliminary X-ray analysis of L-methionine gamma-lyase 1 from Entamoeba histolytica.Acta crystallographica. Section F, Structural biology and crystallization communications · 2008
    Article
  14. Expression, purification and crystallization of L-methionine gamma-lyase 2 from Entamoeba histolytica.Acta crystallographica. Section F, Structural biology and crystallization communications · 2006
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

D V MamaevaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Vavilov str. 32, 119991 Moscow, Russia.
E A Morozova
A D Nikulin
S V Revtovich
S V Nikonov
M B Garber
T V Demidkina
Engelhardt Institute of Molecular Biology · RUInstitute of Protein Research · RU

Funding

Structure and Mechanisms of PLP Dependent LyasesR03TW006045 · FIC · UNIVERSITY OF GEORGIA (UGA) · PI PHILLIPS, ROBERT STEPHEN · 2004 to 2006
$114k
FIC NIH HHS 1 R03 TW006045-01A2FIC NIH HHS R03 TW006045
6 · The paper itself

Abstract

L-Methionine gamma-lyase (MGL) is a pyridoxal 5'-phosphate (PLP) dependent enzyme that catalyzes gamma-elimination of L-methionine. The crystal structure of MGL from Citrobacter freundii has been determined at 1.9 A resolution. The spatial fold of the protein is similar to those of MGLs from Pseudomonas putida and Trichomonas vaginalis. The comparison of these structures revealed that there are differences in PLP-binding residues and positioning of the surrounding flexible loops.

Indexed as

Bacterial ProteinsBinding SitesCarbon-Sulfur LyasesCitrobacter freundiiCrystallography, X-RayMolecular StructureProtein Structure, SecondaryBacterial ProteinsCarbon-Sulfur LyasesL-methionine gamma-lyase

Identifiers

PMID16511092
PMCPMC1952331
OpenAlexW1942256239

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.