Evidence map›Paper›PMID 16509988›Full record

SynthesisBMC medical genetics2006

Evidence for a gene influencing heart rate on chromosome 5p13-14 in a meta-analysis of genome-wide scans from the NHLBI Family Blood Pressure Program.

Jason M Laramie, Jemma B Wilk, Steven C Hunt, R Curtis Ellison, Aravinda Chakravarti, Eric Boerwinkle, Richard H Myers

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC medical genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Jason M LaramieDepartment of Neurology, Boston University School of Medicine, Boston, MA, USA. laramiej@bu.edu
Jemma B Wilk
Steven C Hunt
R Curtis Ellison
Aravinda Chakravarti
Eric Boerwinkle
Richard H Myers
Boston University · USJohns Hopkins University · USThe University of Texas Health Science Center at Houston · USUniversity of Utah · US

Funding

MOLECULAR EPIDEMIOLOGY OF ESSENTIAL HYPERTENSIONR37HL051021 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A. · 1999 to 2008
$10.8M
The Family Blood Pressure Program (HyperGEN Network)U01HL054471 · NHLBI · UNIVERSITY OF UTAH · PI HUNT, STEVEN C. · 2000 to 2007
$7.4M
The Family Blood Pressure Program (Program Data Center)U01HL054473 · NHLBI · WASHINGTON UNIVERSITY · PI RAO, DABEERU C · 2000 to 2008
$5.8M
HYPERTENSION IN POPULATIONS OF WEST AFRICAN ORIGINR37HL045508 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI COOPER, RICHARD STANLEY · 1998 to 2008
$3.3M
NHLBI FAMILY BLOOD PRESSURE PROGRAM-HYPERGEN-MPLS FCU01HL054496 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI PANKOW, JAMES S · 2000 to 2004
$3.2M
NHLBI FAMILY BLOOD PRESSURE PROGRAM (GENOA)U01HL054464 · NHLBI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI TURNER, STEPHEN T · 2000 to 2004
$2.6M
HYPERGEN - BIRMINGHAM FIELD CENTERU01HL054495 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LEWIS, CORA E · 2000 to 2004
$923k
HYPERGEN CENTRAL BIOCHEMISTRY LABORATORYU01HL054472 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ECKFELDT, JOHN H · 2000 to 2004
$879k
HYPERGEN-NCU01HL054509 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI NORTH, KARI E · 2000 to 2004
$640k
HYPERGEN-BOSTON UNIVERSITY/FRAMINGHAM FIELD CENTERU01HL054497 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ELLISON, CURTIS R. · 2000 to 2004
$430k
HYPERGENU10HL054509 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI HEISS, GERARDO · 1995 to 1999
–
CELL CALCIUM AND HYPERTENSION IN BLACKSR01HL047910 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI COOPER, RICHARD STANLEY · 1991 to 1994
–
NHLBI NIH HHS HL54464NHLBI NIH HHS HL54471NHLBI NIH HHS HL54472NHLBI NIH HHS HL54473NHLBI NIH HHS HL54495NHLBI NIH HHS HL54496NHLBI NIH HHS HL54497NHLBI NIH HHS HL54509NHLBI NIH HHS HL54515NHLBI NIH HHS R01 HL51021NHLBI NIH HHS R37 HL045508NHLBI NIH HHS R37 HL051021NHLBI NIH HHS U01 HL054464NHLBI NIH HHS U01 HL054471NHLBI NIH HHS U01 HL054472NHLBI NIH HHS U01 HL054473NHLBI NIH HHS U01 HL054495NHLBI NIH HHS U01 HL054496NHLBI NIH HHS U01 HL054497NHLBI NIH HHS U01 HL054509NHLBI NIH HHS U01 HL45508NHLBI NIH HHS U01 HL47910NHLBI NIH HHS U10 HL054464NHLBI NIH HHS U10 HL054471NHLBI NIH HHS U10 HL054472NHLBI NIH HHS U10 HL054473NHLBI NIH HHS U10 HL054481NHLBI NIH HHS U10 HL054495NHLBI NIH HHS U10 HL054496NHLBI NIH HHS U10 HL054497NHLBI NIH HHS U10 HL054509NHLBI NIH HHS U10 HL54481
6 · The paper itself

Abstract

backgroundElevated resting heart rate has been shown in multiple studies to be a strong predictor of cardiovascular disease. Previous family studies have shown a significant heritable component to heart rate with several groups conducting genomic linkage scans to identify quantitative trait loci.

methodsWe performed a genome-wide linkage scan to identify quantitative trait loci influencing resting heart rate among 3,282 Caucasians and 3,989 African-Americans in three independent networks comprising the Family Blood Pressure Program (FBPP) using 368 microsatellite markers. Mean heart rate measurements were used in a regression model including covariates for age, body mass index, pack-years, currently drinking alcohol (yes/no), hypertension status and medication usage to create a standardized residual for each gender/ethnic group within each study network. This residual was used in a nonparametric variance component model to generate a LOD score and a corresponding P value for each ethnic group within each study network. P values from each ethnic group and study network were merged using an adjusted Fisher's combining P values method and the resulting P values were converted to LOD scores. The entire analysis was redone after individuals currently taking beta-blocker medication were removed.

resultsWe identified significant evidence of linkage (LOD = 4.62) to chromosome 10 near 142.78 cM in the Caucasian group of HyperGEN. Between race and network groups we identified a LOD score of 1.86 on chromosome 5 (between 39.99 and 45.34 cM) in African-Americans in the GENOA network and the same region produced a LOD score of 1.12 among Caucasians within a different network (HyperGEN). Combining all network and race groups we identified a LOD score of 1.92 (P = 0.0013) on chromosome 5p13-14. We assessed heterogeneity for this locus between networks and ethnic groups and found significant evidence for low heterogeneity (P < or = 0.05).

conclusionWe found replication (LOD > 1) between ethnic groups and between study networks with low heterogeneity on chromosome 5p13-14 suggesting that a gene in this region influences resting heart rate.

Indexed as

Chromosomes, Human, Pair 5Quantitative Trait LociAdultBlack or African AmericanBlack PeopleFemaleGenetic LinkageGenome, HumanGenotypeHeart RateHumansMaleNational Institutes of Health (U.S.)United StatesWhite People

Identifiers

PMID16509988
PMCPMC1413518
OpenAlexW1877857827

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.