Evidence map›Paper›PMID 16509580›Full record

ArticleJournal of medicinal chemistry2006

Synthesis and anti-HIV activity of D- and L-thietanose nucleosides.

Hyunah Choo, Xin Chen, Vikas Yadav, Jianing Wang, Raymond F Schinazi, Chung K Chu

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 41 citations in OpenAlex.

  1. An updated review of enantioselective syntheses and biological actions of carbanucleosides.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2026
    Review
  2. Article
  3. Recent synthesis of thietanes.Beilstein journal of organic chemistry · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hyunah ChooCollege of Pharmacy, The University of Georgia, Athens, Georgia 30602, USA.
Xin Chen
Vikas Yadav
Jianing Wang
Raymond F Schinazi
Chung K Chu
University of Georgia · USEmory University · US

Funding

Synthesis and Biotransformation of Anti-HIV ProdrugsR37AI025899 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI CHU, CHUNG K · 2001 to 2010
$4.4M
SYNTHESIS &EVALUATION OF ANTI-HIV NUCLEOSIDESR01AI032351 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI CHU, CHUNG K · 1992 to 2005
$1.7M
SYNTHESIS &BIOTRANSFORMATION OF ANTI-HIV PRODURUGSR01AI025899 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI CHU, CHUNG K · 1987 to 2000
$354k
NIAID NIH HHS AI25899NIAID NIH HHS AI32351NIAID NIH HHS R01 AI025899NIAID NIH HHS R01 AI032351NIAID NIH HHS R37 AI025899
6 · The paper itself

Abstract

Various D- and L-thietanose nucleosides were synthesized from D- and L-xylose. The four-membered thietane ring was efficiently synthesized by the cyclization of 1-thioacetyl-3-mesylate (4/38) under basic conditions. Condensation with various heterocyclic bases was conducted via Pummerer-type rearrangement to afford various nucleoside derivatives. Among the synthesized nucleosides, D-uridine (23), D-cytidine (24), D-5-fluorocytidine (25), and L-cytidine (52) analogues showed moderate anti-HIV activity, with EC50 = 6.9, 1.3, 5.8, and 14.1 microM, respectively. However, these four nucleoside analogues are cytotoxic in peripheral blood mononuclear and CEM cells. The other nucleosides are neither active nor cytotoxic. Interestingly, the oxetanocin A analogue 33 was not active. Comparison of the minimized reverse transcriptases (RTs) complexed with the corresponding triphosphates of the cytidine analogue 24 and the adenosine analogue 33 by molecular modeling studies showed that there is no difference in the binding mode of the triphosphate of the cytidine analogue 24 to the active site of HIV-1 RT from that of the triphosphate of the adenosine analogue 33. Modeling studies on the initial monophosphorylation step by deoxycytidine kinase showed that the catalytic efficiency of phosphorylation through a nucleophilic attack of the 4'-hydroxyl group of thietanose on the gamma-phosphate of ATP is diminished in the case of L-cytidine analogue (52) due to the increased distance between the 4'-hydroxyl group and the gamma-phosphate.

Indexed as

AdenineAnti-HIV AgentsBinding SitesCatalysisCell LineDeoxycytidine KinaseHIV-1HIV Reverse TranscriptaseHumansModels, MolecularMolecular ConformationPhosphorylationPyrimidine NucleosidesStereoisomerismStructure-Activity RelationshipSulfidesAdenineAnti-HIV AgentsDeoxycytidine KinaseHIV Reverse TranscriptaseoxetanocinPyrimidine NucleosidesSulfidesXylose

Identifiers

PMID16509580
PMCPMC2533431
OpenAlexW2094718004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.