Evidence map›Paper›PMID 16505996›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2006

An enhanced microsatellite map of diploid Fragaria.

D J Sargent, J Clarke, D W Simpson, K R Tobutt, P Arús, A Monfort, S Vilanova, B Denoyes-Rothan, M Rousseau, K M Folta and 2 more

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 118 citations in OpenAlex.

  1. Review
  2. Metabolic plasticity and adaptive evolution inFrontiers in plant science · 2025
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  15. Review
  16. Article
  17. Construction of an integrated high density simple sequence repeat linkage map in cultivated strawberry (Fragaria × ananassa) and its applicability.DNA research : an international journal for rapid publication of reports on genes and genomes · 2013
    Article
  18. Article
  19. The mode of inheritance in tetraploid cut roses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

D J SargentEast Malling Research (EMR), New Road, East Malling, Kent, ME19 6BJ, UK. dan.sargent@emr.ac.uk
J Clarke
D W Simpson
K R Tobutt
P Arús
A Monfort
S Vilanova
B Denoyes-Rothan
M Rousseau
K M Folta
N V Bassil
N H Battey
East Malling Research (United Kingdom) · GBInstitute for Research and Technology in Food and Agriculture · ESUniversity of Reading · GBBiologie du Fruit et Pathologie · FRNational Clonal Germplasm Repository · USUnité de Recherche Œnologie · FRUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A total of 45 microsatellites (SSRs) were developed for mapping in Fragaria. They included 31 newly isolated codominant genomic SSRs from F. nubicola and a further 14 SSRs, derived from an expressed sequence tagged library (EST-SSRs) of the cultivated strawberry, F. x ananassa. These, and an additional 64 previously characterised but unmapped SSRs and EST-SSRs, were scored in the diploid Fragaria interspecific F2 mapping population (FVxFN) derived from a cross between F. vesca 815 and F. nubicola 601. The cosegregation data of these 109 SSRs, and of 73 previously mapped molecular markers, were used to elaborate an enhanced linkage map. The map is composed of 182 molecular markers (175 microsatellites, six gene specific markers and one sequence-characterised amplified region) and spans 424 cM over seven linkage groups. The average marker spacing is 2.3 cM/marker and the map now contains just eight gaps longer than 10 cM. The transferability of the new SSR markers to the cultivated strawberry was demonstrated using eight cultivars. Because of the transferable nature of these markers, the map produced will provide a useful reference framework for the development of linkage maps of the cultivated strawberry and for the development of other key resources for Fragaria such as a physical map. In addition, the map now provides a framework upon which to place transferable markers, such as genes of known function, for comparative mapping purposes within Rosaceae.

Indexed as

Chromosome MappingChromosomes, PlantDiploidyMicrosatellite RepeatsDNA, PlantExpressed Sequence TagsFragariaGene LibraryGenes, PlantGenetic LinkageGenetic MarkersGenome, PlantPolymorphism, GeneticDNA, PlantGenetic Markers

Identifiers

PMID16505996
OpenAlexW1968777914

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.