Evidence map›Paper›PMID 16505283›Full record

ArticleJournal of clinical pathology2006

Globicatella bacteraemia identified by 16S ribosomal RNA gene sequencing.

S K P Lau, P C Y Woo, N K H Li, J L L Teng, K-W Leung, K H L Ng, T-L Que, K-Y Yuen

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of clinical pathology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Microbiome Analysis Reveals the Attenuation Effect ofFrontiers in cellular and infection microbiology · 2020
    Article
  7. Article
  8. Open forum infectious diseases · 2017
    Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

S K P LauDepartment of Microbiology, University of Hong Kong, Hong Kong.
P C Y Woo
N K H Li
J L L Teng
K-W Leung
K H L Ng
T-L Que
K-Y Yuen
University of Hong Kong · HKTuen Mun Hospital · CNQueen Mary Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlobicatella are streptococcus-like organisms that have been rarely isolated from clinical specimens. Their epidemiology and clinical significance remain largely unknown.

aimsTo describe two cases of Globicatella bacteraemia identified by 16S ribosomal RNA (rRNA) gene sequencing.

methodsTwo unidentified streptococcus-like bacteria isolated from blood cultures of patients were subject to 16S rRNA gene sequencing.

resultsTwo cases of Globicatella bacteraemia were identified by 16S rRNA gene sequencing. In the first case, a gram positive coccus was isolated from the blood culture of an 80 year old woman with diabetes mellitus and nosocomial sepsis, who died the day after developing the bacteraemia. The bacterium was unidentified by conventional phenotypic tests, the Vitek (gram positive identification) and the ATB expression (ID32 Strep) systems. In the second case, a similar bacterium was isolated from the blood culture of a 92 year old woman with polymicrobial acute pyelonephritis complicated by septic shock, who subsequently recovered after antibiotic treatment. 16S rRNA gene sequencing of the two isolates showed 0.5% nucleotide difference from that of G. sulfidifaciens and 0.7% nucleotide difference from that of G. sanguinis, indicating that they were Globicatella species.

conclusionsBecause Globicatella is rarely encountered in clinical microbiology laboratories, it may have been overlooked or misidentified in these cases. 16S rRNA gene sequencing is a useful tool to better characterise the epidemiology and clinical significance of Globicatella.

Indexed as

Genes, rRNAAged, 80 and overBacteremiaBacterial Typing TechniquesBase SequenceCross InfectionFemaleHumansMolecular Sequence DataRNA, BacterialRNA, Ribosomal, 16SSequence Analysis, RNASequence HomologyStaphylococcal InfectionsStaphylococcusRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID16505283
PMCPMC1860353
OpenAlexW2134525431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.