Evidence map›Paper›PMID 16505102›Full record

ArticleMolecular cancer therapeutics2006

A novel norindenoisoquinoline structure reveals a common interfacial inhibitor paradigm for ternary trapping of the topoisomerase I-DNA covalent complex.

Christophe Marchand, Smitha Antony, Kurt W Kohn, Mark Cushman, Alexandra Ioanoviciu, Bart L Staker, Alex B Burgin, Lance Stewart, Yves Pommier

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 162 citations in OpenAlex.

  1. Alkyne Activation in the Diversity Oriented Synthesis of spChemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Article
  2. Article
  3. Topoisomerase Assays.Current protocols · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. 6-Amino-2-methyl-8-phenyl-1,2,3,4-tetra-hydro-iso-quinoline-5,7-dicarbo-nitrile.Acta crystallographica. Section E, Structure reports online · 2013
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Tyrosyl-DNA Phosphodiesterase 1 (Tdp1) inhibitors.Expert opinion on therapeutic patents · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Christophe MarchandLaboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute, Building 37, Room 5068, Bethesda, MD 20892-4255, USA.
Smitha Antony
Kurt W Kohn
Mark Cushman
Alexandra Ioanoviciu
Bart L Staker
Alex B Burgin
Lance Stewart
Yves Pommier
Center for Cancer Research · USPurdue University West Lafayette · USNational Cancer Institute · US

Funding

Novel Topoisomerase I InhibitorsU01CA089566 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI CUSHMAN, MARK S · 2001 to 2014
$3.0M
DNA TOPOISOMERASES AS TARGET OF ACTION OF ANTICANCER DRUGSZ01BC006161 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 1996 to 2008
$1.5M
Novel Indenoisoquinoline Topoisomerase I InhibitorsR01CA089566 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI CUSHMAN, MARK S · 2004 to 2005
$467k
Intramural NIH HHS Z99 CA999999NCI NIH HHS U01 CA89566
6 · The paper itself

Abstract

We show that five topoisomerase I inhibitors (two indenoisoquinolines, two camptothecins, and one indolocarbazole) each intercalate between the base pairs flanking the cleavage site generated during the topoisomerase I catalytic cycle and are further stabilized by a network of hydrogen bonds with topoisomerase I. The interfacial inhibition paradigm described for topoisomerase I inhibitors can be generalized to a variety of natural products that trap macromolecular complexes as they undergo catalytic conformational changes that create hotspots for drug binding. Stabilization of such conformational states results in uncompetitive inhibition and exemplifies the relevance of screening for ligands and drugs that stabilize ("trap") these macromolecular complexes.

Indexed as

Topoisomerase I InhibitorsCamptothecinCrystallographyDNADNA DamageDNA Topoisomerases, Type IEnzyme InhibitorsHumansHydrogen BondingIndenesIsoquinolinesMolecular StructureTopotecanCamptothecinDNADNA Topoisomerases, Type IEnzyme InhibitorsIndenesIsoquinolinesnorindenoisoquinolineTopoisomerase I InhibitorsTopotecan

Identifiers

PMID16505102
PMCPMC2860177
OpenAlexW2095595702

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.