Evidence map›Paper›PMID 16502120›Full record

ArticleJournal of bone and mineral metabolism2006

CA repeat polymorphism of the TNFR2 gene is not associated with bone mineral density in two independent Caucasian populations.

Qing-Yang Huang, Hui Shen, Hong-Yi Deng, Theresa Conway, Leo Elze, K Michael Davies, Robert R Recker, Hong-Wen Deng

Abstract read
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In one paragraph

Article in Journal of bone and mineral metabolism, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. High resolution linkage and linkage disequilibrium analyses of chromosome 1p36 SNPs identify new positional candidate genes for low bone mineral density.Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Qing-Yang HuangCollege of Life Sciences, Central China Normal University, Hubei, China.
Hui Shen
Hong-Yi Deng
Theresa Conway
Leo Elze
K Michael Davies
Robert R Recker
Hong-Wen Deng
Creighton University · USXi'an Jiaotong University · CN

Funding

USHERIN--FUNCTION, EXPRESSION, AND ROLE IN PATHOGENESISP01DC001813 · NIDCD · FATHER FLANAGAN'S BOYS'HOME · PI KIMBERLING, WILLIAM J · 1993 to 2003
$4.7M
CHARACTERIZATION OF DELETERIOUS GENOMIC MUTATIONSR01GM060402 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2000 to 2005
$889k
Genetic Basis of Osteoporotic Fractures and Bone MassK01AR002170 · NIAMS · CREIGHTON UNIVERSITY · PI DENG, HONG-WEN · 2001 to 2005
$505k
GENETIC LINKAGE TO LOW PEAK BONE MASSR01AR045349 · NIAMS · CREIGHTON UNIVERSITY · PI RECKER, ROBERT R. · 1997 to 2000
$188k
NIAMS NIH HHS K01 AR02170-01NIAMS NIH HHS R01 AR45349-01NIDCD NIH HHS P01 DC01813-07NIGMS NIH HHS R01 GM60402-01A1
6 · The paper itself

Abstract

Osteoporosis has a strong genetic component, but the genes involved are poorly defined. Genome-wide scans in multiple populations have identified chromosome 1p36 as one region linked to bone mineral density (BMD). The tumor necrosis factor receptor 2 (TNFR2) at 1p36 is a positional and functional candidate gene in osteoporosis. In this study, we conducted linkage and association tests between the CA repeat polymorphism of the TNFR2 gene and BMD in two large independent samples using the quantitative transmission disequilibrium test (QTDT) program. The first group of subjects was composed of 1836 individuals from 79 multigeneration pedigrees. The second group was a randomly ascertained set of 636 individuals from 157 nuclear families. We found no evidence of association or linkage for spine or hip BMD in the samples of the multigenerational pedigrees or nuclear families. Through testing for association and for linkage, our data do not support the TNFR2 gene as a QTL underlying hip or spine BMD variation in our Caucasian populations.

Indexed as

Bone DensityPolymorphism, GeneticAdultAgedAged, 80 and overFamily HealthFemaleGenetic LinkageGenomeGenotypeHumansLinkage DisequilibriumMaleMiddle AgedModels, StatisticalOsteoporosisReceptors, Tumor Necrosis Factor, Type II

Identifiers

PMID16502120
OpenAlexW1973163197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.