Evidence map›Paper›PMID 16501076›Full record

ArticleJournal of virology2006

Naïve T-cell dynamics in human immunodeficiency virus type 1 infection: effects of highly active antiretroviral therapy provide insights into the mechanisms of naive T-cell depletion.

Michele Di Mascio, Irini Sereti, Lynn T Matthews, Ven Natarajan, Joseph Adelsberger, Richard Lempicki, Christian Yoder, Elizabeth Jones, Catherine Chow, Julia A Metcalf and 4 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 69 citations in OpenAlex.

  1. Trial
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  9. Observational
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  13. Modeling the immune response to HIV infection.Current opinion in systems biology · 2018
    Article
  14. Article
  15. A novel anti-HIV immunotherapy to cure HIV.AIDS (London, England) · 2017
    Article
  16. Article
  17. Mathematics in modern immunology.Interface focus · 2016
    Review
  18. Article
  19. Article
  20. Quantifying T lymphocyte turnover.Journal of theoretical biology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Michele Di MascioNational Institute of Allergy and Infectious Diseases, National Institutes of Health, 6700 B Rockledge Drive, MSC 7609, Bethesda, MD 20892, USA. mdimascio@niaid.nih.gov
Irini Sereti
Lynn T Matthews
Ven Natarajan
Joseph Adelsberger
Richard Lempicki
Christian Yoder
Elizabeth Jones
Catherine Chow
Julia A Metcalf
Igor A Sidorov
Dimiter S Dimitrov
Michael A Polis
Joseph A Kovacs
National Institutes of Health · USNational Institutes of Health Clinical Center · USScience Applications International Corporation (United States) · USNational Institute of Allergy and Infectious Diseases · USNational Cancer Institute · US

Funding

MOLECULAR STUDIES OF HUMAN PNEUMOCYSTIS CARINIIZ01CL000192 · CLC · CLINICAL CENTER · PI KOVACS, JOSEPH A · 1998 to 2008
$170k
STUDIES OF LYMPHOCYTE KINETICS IN HEALTHY AND HIV-INFECTED PATIENTSZ01CL000191 · CLC · CLINICAL CENTER · PI KOVACS, JOSEPH A · 1998 to 2008
$128k
Studies Of Lymphocyte Kinetics In Healthy And HIV-infected PatientsZIACL000191 · CLC · CLINICAL CENTER · PI KOVACS, JOSEPH A · 2009 to 2019
$0k
Molecular Studies Of Human Pneumocystis CariniiZIACL000192 · CLC · CLINICAL CENTER · PI KOVACS, JOSEPH A · 2009 to 2025
$0k
Collaborative Clinical Research Studies of HIV and EmergZ01AI000980 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI POLIS, MICHAEL L. · 2006 to 2006
–
Intramural NIH HHS
6 · The paper itself

Abstract

Both naïve CD4+ and naïve CD8+ T cells are depleted in individuals with human immunodeficiency virus type 1 (HIV-1) infection by unknown mechanisms. Analysis of their dynamics prior to and after highly active antiretroviral therapy (HAART) could reveal possible mechanisms of depletion. Twenty patients were evaluated with immunophenotyping, intracellular Ki67 staining, T-cell receptor excision circle (TREC) quantitation in sorted CD4 and CD8 cells, and thymic computed tomography scans prior to and approximately 6 and approximately 18 months after initiation of HAART. Naïve T-cell proliferation decreased significantly during the first 6 months of therapy (P < 0.01) followed by a slower decline. Thymic indices did not change significantly over time. At baseline, naïve CD4+ T-cell numbers were lower than naive CD8+ T-cell numbers; after HAART, a greater increase in naïve CD4+ T cells than naïve CD8+ T cells was observed. A greater relative change (n-fold) in the number of TREC+ T cells/mul than in naïve T-cell counts was observed at 6 months for both CD4+ (median relative change [n-fold] of 2.2 and 1.7, respectively; P < 0.01) and CD8+ T cell pools (1.4 and 1.2; P < 0.01). A more pronounced decrease in the proliferation than the disappearance rate of naïve T cells after HAART was observed in a second group of six HIV-1-infected patients studied by in vivo pulse labeling with bromodeoxyuridine. These observations are consistent with a mathematical model where the HIV-1-induced increase in proliferation of naïve T cells is mostly explained by a faster recruitment into memory cells.

Indexed as

Antiretroviral Therapy, Highly ActiveAdultCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesHIV-1HIV InfectionsHumansImmunophenotypingLymphocyte ActivationLymphocyte CountMiddle AgedRadiographyReceptors, Antigen, T-CellThymus GlandT-LymphocytesT-Lymphocyte SubsetsReceptors, Antigen, T-Cell

Identifiers

PMID16501076
PMCPMC1395465
OpenAlexW2151889813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.