Evidence map›Paper›PMID 16500974›Full record

ArticleBiophysical journal2006

Carboxy terminus splice variation alters ClC channel gating and extracellular cysteine reactivity.

Liping He, Jerod Denton, Keith Nehrke, Kevin Strange

Abstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. The voltage-gated anion channels encoded by clh-3 regulate egg laying in C. elegans by modulating motor neuron excitability.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  4. The ClC-3 chloride channel and osmoregulation in the European sea bass, Dicentrarchus labrax.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2013
    Article
  5. Article
  6. Article
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  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Liping HeDepartment of Anesthesiology, Vanderbilt University Medical Center, Nashville, Tennessee 37232-2520, USA.
Jerod Denton
Keith Nehrke
Kevin Strange

Funding

Structure-function analysis of the volume-regulated anion channel VRAC using novel LRRC8 chimerasR01DK051610 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DENTON, JEROD S. · 1996 to 2025
$8.9M
pH Regulation of Fat Storage in the Nematode IntestineR01HL080810 · NHLBI · UNIVERSITY OF ROCHESTER · PI NEHRKE, KEITH W · 2004 to 2007
$1.2M
NHLBI NIH HHS R01 HL080810NHLBI NIH HHS R01 HL80810NIDDK NIH HHS DK51610NIDDK NIH HHS R01 DK051610
6 · The paper itself

Abstract

CLH-3a and CLH-3b are Caenorhabditis elegans ClC channel splice variants that exhibit striking differences in voltage, Cl(-), and H(+) sensitivity. The major primary structure differences between the channels include a 71 amino acid CLH-3a N-terminal extension and a 270 amino acid extension of the CLH-3b C-terminus. Deletion of the CLH-3a N-terminus or generation of a CLH-3a/b chimera has no effect on channel gating. In contrast, deletion of a 169 amino acid C-terminal CLH-3b splice insert or deletion of the last 11 amino acids of cystathionine-beta-synthase domain 1 gives rise to functional properties identical to those of CLH-3a. Voltage-, Cl(-)-, and H(+)-dependent gating of both channels are lost when their glutamate gates are mutated to alanine. Glutamate gate cysteine mutants exhibit similar degrees of inhibition by MTSET, but the inhibition time constant of CLH-3b is sevenfold greater than that of CLH-3a. Differences in MTSET inhibition are reversed by deletion of the same cytoplasmic C-terminal regions that alter CLH-3b gating. Our results indicate that splice variation of the CLH-3b cytoplasmic C-terminus alters extracellular structure and suggest that differences in the conformation of the outer pore vestibule and associated glutamate gate may account for differences in CLH-3a and CLH-3b gating.

Indexed as

Amino Acid SubstitutionCaenorhabditis elegans ProteinsCell LineChloride ChannelsCysteineDNA, RecombinantGenetic VariationHumansIon Channel GatingKidneyMembrane PotentialsMutagenesis, Site-DirectedProtein BindingStructure-Activity RelationshipCaenorhabditis elegans ProteinsChloride Channelsclh-3 protein, C elegansCysteineDNA, Recombinant

Identifiers

PMID16500974
PMCPMC1440737

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.