Evidence map›Paper›PMID 16491350›Full record

ArticleImmunogenetics2006

Associations of the IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFN (gamma) R1 cytokine receptor genes with AIDS progression in a French AIDS cohort.

Hervé Do, Alexandre Vasilescu, Gora Diop, Thomas Hirtzig, Cédric Coulonges, Taoufik Labib, Simon C Heath, Jean-Louis Spadoni, Amu Therwath, Mark Lathrop and 2 more

Abstract read
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In one paragraph

Article in Immunogenetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Molecular immunity to mycobacteria: knowledge from the mutation and phenotype spectrum analysis of Mendelian susceptibility to mycobacterial diseases.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2011
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Hervé DoEquipe génomique, bioinformatique et pathologies du système immunitaire, INSERM U736, 15 rue de l'Ecole de Médecine, 75006, Paris, France.
Alexandre Vasilescu
Gora Diop
Thomas Hirtzig
Cédric Coulonges
Taoufik Labib
Simon C Heath
Jean-Louis Spadoni
Amu Therwath
Mark Lathrop
Fumihiko Matsuda
Jean-François Zagury
Centre National de Recherche en Génomique Humaine · FRHôtel-Dieu de Paris · FRInserm · FRConservatoire National des Arts et Métiers · FRGénomique Bioinformatique et Applications · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have performed an extensive analysis of Th1/Th2 cytokine receptors IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFNgammaR1 gene polymorphisms to evaluate their impact on AIDS progression. The coding regions and promoters of these genes were sequenced in the genetics of resistance to immunodeficiency virus cohort, composed of 327 HIV-1-positive patients with extreme progression phenotypes, slow and rapid progressors, and of 446 healthy control subjects, all of them of Caucasian descent. Overall, 104 single nucleotide polymorphisms and four insertions/deletions with a minor allelic frequency higher than 1% were identified, 21 of them being newly characterized. We observed weak associations for 13 polymorphisms of IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFNgammaR1, and 11 haplotypes of IL2Ralpha, IL4Ralpha, and IFNgammaR1. However, we could not relate these positive signals to any relevant biological information on the gene function. To affirm these putative associations in AIDS, further confirmation on other AIDS cohorts will be needed. This complete catalog of polymorphisms in IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFNgammaR1 cytokine receptor genes should also be useful for investigating associations in other immune-related diseases.

Indexed as

Polymorphism, Single NucleotideAcquired Immunodeficiency SyndromeCohort StudiesDisease ProgressionFranceHumansInterferon gamma ReceptorInterleukin-2 Receptor alpha SubunitInterleukin-4 Receptor alpha SubunitReceptors, InterferonReceptors, InterleukinReceptors, Interleukin-10Receptors, Interleukin-2Receptors, Interleukin-4Th1 CellsTh2 CellsIL2RA protein, humanIL4R protein, humanInterferon gamma ReceptorInterleukin-2 Receptor alpha SubunitInterleukin-4 Receptor alpha SubunitReceptors, InterferonReceptors, InterleukinReceptors, Interleukin-10Receptors, Interleukin-2Receptors, Interleukin-4

Identifiers

PMID16491350
OpenAlexW2487600432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.