Evidence map›Paper›PMID 16489225›Full record

ArticleGenetics2006

High-resolution quantitative trait locus mapping reveals sign epistasis controlling ovariole number between two Drosophila species.

Virginie Orgogozo, Karl W Broman, David L Stern

Abstract readComparative Study
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
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  3. International journal of molecular sciences · 2022
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  9. Genetic and Transgenic Reagents forG3 (Bethesda, Md.) · 2017
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  16. Heterozygosity and its unexpected correlations with hybrid sterility.Evolution; international journal of organic evolution · 2011
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  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Virginie OrgogozoDepartment of Ecology and Evolutionary Biology, Princeton University, New Jersey 08544, USA. virginie.orgogozo@normalesup.org
Karl W Broman
David L Stern

Funding

The molecular basis of morphological evolutionR01GM063622 · NIGMS · PRINCETON UNIVERSITY · PI STERN, DAVID L · 2001 to 2010
$2.6M
Statistical Methods and Software for QTL MappingR01GM074244 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BROMAN, KARL W · 2005 to 2013
$2.3M
NIGMS NIH HHS GM-074244NIGMS NIH HHS GM-6362201NIGMS NIH HHS R01 GM074244
6 · The paper itself

Abstract

Identifying the genes underlying genetically complex traits is of fundamental importance for medicine, agriculture, and evolutionary biology. However, the level of resolution offered by traditional quantitative trait locus (QTL) mapping is usually coarse. We analyze here a trait closely related to fitness, ovariole number. Our initial interspecific mapping between Drosophila sechellia (8 ovarioles/ovary) and D. simulans (15 ovarioles/ovary) identified a major QTL on chromosome 3 and a minor QTL on chromosome 2. To refine the position of the major QTL, we selected 1038 additional recombinants in the region of interest using flanking morphological markers (selective phenotyping). This effort generated approximately one recombination event per gene and increased the mapping resolution by approximately seven times. Our study thus shows that using visible markers to select for recombinants can efficiently increase the resolution of QTL mapping. We resolved the major QTL into two epistatic QTL, QTL3a and QTL3b. QTL3a shows sign epistasis: it has opposite effects in two different genetic backgrounds, the presence vs. the absence of the QTL3b D. sechellia allele. This property of QTL3a allows us to reconstruct the probable order of fixation of the QTL alleles during evolution.

Indexed as

Chromosome MappingEpistasis, GeneticAnimalsChromosomesCrosses, GeneticDrosophilaEvolution, MolecularFemaleOvaryQuantitative Trait Loci

Identifiers

PMID16489225
PMCPMC1461429

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.