Evidence map›Paper›PMID 16484184›Full record

ArticleJournal of bacteriology2006

Nla18, a key regulatory protein required for normal growth and development of Myxococcus xanthus.

Michelle E Diodati, Faisury Ossa, Nora B Caberoy, Ivy R Jose, Wataru Hiraiwa, Michele M Igo, Mitchell Singer, Anthony G Garza

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  4. Review
  5. The σScientific reports · 2021
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  10. A cascade of coregulating enhancer binding proteins initiates and propagates a multicellular developmental program.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Article
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  13. Chemotaxis as an emergent property of a swarm.Journal of bacteriology · 2008
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  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Michelle E DiodatiDepartment of Biology, Syracuse University, BRL Room 200, 130 College Place, Syracuse, NY 13244-1220, USA. agarza@syr.edu
Faisury Ossa
Nora B Caberoy
Ivy R Jose
Wataru Hiraiwa
Michele M Igo
Mitchell Singer
Anthony G Garza
University of California, Davis · USCzech Academy of Sciences, Institute of Microbiology · CZSyracuse University · USWashington State University · US

Funding

UC Davis Biology ProgramR25GM056765 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI GOMES, ALDRIN V. · 1998 to 2019
$9.7M
Control of Initiation of Development in M. xanthusR01GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 2003 to 2006
$982k
CONTROL OF INITIATION OF DEVELOPMENT IN M XANTHUSR29GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 1997 to 2001
$250k
NIGMS NIH HHS GM54592NIGMS NIH HHS GM56765BNIGMS NIH HHS R01 GM054592NIGMS NIH HHS R25 GM056765NIGMS NIH HHS R29 GM054592NIGMS NIH HHS T32GM0737
6 · The paper itself

Abstract

NtrC-like activators regulate the transcription of a wide variety of adaptive genes in bacteria. Previously, we demonstrated that a mutation in the ntrC-like activator gene nla18 causes defects in fruiting body development in Myxococcus xanthus. In this report, we describe the effect that nla18 inactivation has on gene expression patterns during development and vegetative growth. Gene expression in nla18 mutant cells is altered in the early stages of fruiting body development. Furthermore, nla18 mutant cells are defective for two of the earliest events in development, production of the intracellular starvation signal ppGpp and production of A-signal. Taken together, these results indicate that the developmental program in nla18 mutant cells goes awry very early. Inactivation of nla18 also causes a dramatic decrease in the vegetative growth rate of M. xanthus cells. DNA microarray analysis revealed that the vegetative expression patterns of more than 700 genes are altered in nla18 mutant cells. Genes coding for putative membrane and membrane-associated proteins are among the largest classes of genes whose expression is altered by nla18 inactivation. This result is supported by our findings that the profiles of membrane proteins isolated from vegetative nla18 mutant and wild-type cells are noticeably different. In addition to genes that code for putative membrane proteins, nla18 inactivation affects the expression of many genes that are likely to be important for protein synthesis and gene regulation. Our data are consistent with a model in which Nla18 controls vegetative growth and development by activating the expression of genes involved in gene regulation, translation, and membrane structure.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsGenes, BacterialLigasesMyxococcus xanthusPII Nitrogen Regulatory ProteinsTranscription FactorsBacterial ProteinsFruA protein, Myxococcus xanthusguanosine 3',5'-polyphosphate synthetasesLigasesPII Nitrogen Regulatory ProteinsTranscription Factors

Identifiers

PMID16484184
PMCPMC1426557
OpenAlexW2107082780

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.