Evidence map›Paper›PMID 16482227›Full record

ArticlePLoS genetics2006

Comparative genomics of emerging human ehrlichiosis agents.

Julie C Dunning Hotopp, Mingqun Lin, Ramana Madupu, Jonathan Crabtree, Samuel V Angiuoli, Jonathan A Eisen, Jonathan Eisen, Rekha Seshadri, Qinghu Ren, Martin Wu and 31 more

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in PLoS genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 285 papers.

0numbers the graph read from it
0cells of the map it votes in
285citing papers in PubMed
23.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

285 citing papers in PubMed, 491 citations in OpenAlex.

  1. Trial
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  14. Host Cells Upregulate Phosphate Transporter PIT1 to InhibitInternational journal of molecular sciences · 2024
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  15. Tick-Borne Bacterial Diseases in Europe: Threats to public health.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Review
  16. Molecular Detection ofVeterinary sciences · 2024
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  19. RipE expression correlates with high ATP levels inFrontiers in cellular and infection microbiology · 2024
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  20. Article

225 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Eisen, Jonathan [corrected to Eisen, Jonathan A]
5 · Who and what money

Authors and funding

41 authors at 4 institutions in 2 countries.

Julie C Dunning HotoppThe Institute for Genomic Research, Rockville, Maryland, USA. jdunning@tigr.org
Mingqun Lin
Ramana Madupu
Jonathan Crabtree
Samuel V Angiuoli
Jonathan A Eisen
Jonathan Eisen
Rekha Seshadri
Qinghu Ren
Martin Wu
Teresa R Utterback
Shannon Smith
Matthew Lewis
Hoda Khouri
Chunbin Zhang
Hua Niu
Quan Lin
Norio Ohashi
Ning Zhi
William Nelson
Lauren M Brinkac
Robert J Dodson
M J Rosovitz
Jaideep Sundaram
Sean C Daugherty
Tanja Davidsen
Anthony S Durkin
Michelle Gwinn
Daniel H Haft
Jeremy D Selengut
Steven A Sullivan
Nikhat Zafar
Liwei Zhou
Faiza Benahmed
Heather Forberger
Rebecca Halpin
Stephanie Mulligan
Jeffrey Robinson
Owen White
Yasuko Rikihisa
Hervé Tettelin
Center for Genomic Science · ITHuman Genome Sciences (United States) · USThe Ohio State University · USJ. Craig Venter Institute · US

Funding

Comparison of Human Ehrlichiosis Agent GenomesR01AI047885 · NIAID · OHIO STATE UNIVERSITY · PI RIKIHISA, YASUKO · 2000 to 2010
$3.0M
NIAID NIH HHS R01 AI047885NIAID NIH HHS R01 AI47885
6 · The paper itself

Abstract

Anaplasma (formerly Ehrlichia) phagocytophilum, Ehrlichia chaffeensis, and Neorickettsia (formerly Ehrlichia) sennetsu are intracellular vector-borne pathogens that cause human ehrlichiosis, an emerging infectious disease. We present the complete genome sequences of these organisms along with comparisons to other organisms in the Rickettsiales order. Ehrlichia spp. and Anaplasma spp. display a unique large expansion of immunodominant outer membrane proteins facilitating antigenic variation. All Rickettsiales have a diminished ability to synthesize amino acids compared to their closest free-living relatives. Unlike members of the Rickettsiaceae family, these pathogenic Anaplasmataceae are capable of making all major vitamins, cofactors, and nucleotides, which could confer a beneficial role in the invertebrate vector or the vertebrate host. Further analysis identified proteins potentially involved in vacuole confinement of the Anaplasmataceae, a life cycle involving a hematophagous vector, vertebrate pathogenesis, human pathogenesis, and lack of transovarial transmission. These discoveries provide significant insights into the biology of these obligate intracellular pathogens.

Indexed as

AnimalsBiotinDNA RepairEhrlichiaEhrlichiosisGenomeGenomicsHumansModels, BiologicalPhylogenyRickettsiaTicksBiotin

Identifiers

PMID16482227
PMCPMC1366493
OpenAlexW2061880687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.