Evidence map›Paper›PMID 16478992›Full record

ArticleMolecular and cellular biology2006

Requirement of fission yeast Cid14 in polyadenylation of rRNAs.

Thein Z Win, Simon Draper, Rebecca L Read, James Pearce, Chris J Norbury, Shao-Win Wang

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Article
  3. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  4. Article
  5. Article
  6. Review
  7. RNA Exosomes and Their Cofactors.Methods in molecular biology (Clifton, N.J.) · 2020
    Review
  8. The multitasking polyA tail: nuclear RNA maturation, degradation and export.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The regulation and functions of the nuclear RNA exosome complex.Nature reviews. Molecular cell biology · 2016
    Review
  16. Article
  17. Subnuclear relocalization and silencing of a chromosomal region by an ectopic ribosomal DNA repeat.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Thein Z WinDepartment of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, United Kingdom.
Simon Draper
Rebecca L Read
James Pearce
Chris J Norbury
Shao-Win Wang
University of Oxford · GBCancer Research UK · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyadenylation in eukaryotes is conventionally associated with increased nuclear export, translation, and stability of mRNAs. In contrast, recent studies suggest that the Trf4 and Trf5 proteins, members of a widespread family of noncanonical poly(A) polymerases, share an essential function in Saccharomyces cerevisiae that involves polyadenylation of nuclear RNAs as part of a pathway of exosome-mediated RNA turnover. Substrates for this pathway include aberrantly modified tRNAs and precursors of snoRNAs and rRNAs. Here we show that Cid14 is a Trf4/5 functional homolog in the distantly related fission yeast Schizosaccharomyces pombe. Unlike trf4 trf5 double mutants, cells lacking Cid14 are viable, though they suffer an increased frequency of chromosome missegregation. The Cid14 protein is constitutively nucleolar and is required for normal nucleolar structure. A minor population of polyadenylated rRNAs was identified. These RNAs accumulated in an exosome mutant, and their presence was largely dependent on Cid14, in line with a role for Cid14 in rRNA degradation. Surprisingly, both fully processed 25S rRNA and rRNA processing intermediates appear to be channeled into this pathway. Our data suggest that additional substrates may include the mRNAs of genes involved in meiotic regulation. Polyadenylation-assisted nuclear RNA turnover is therefore likely to be a common eukaryotic mechanism affecting diverse biological processes.

Indexed as

Base SequenceCell NucleolusChromosome SegregationDNA-Directed DNA PolymeraseDNA-Directed RNA PolymerasesExoribonucleasesExosome Multienzyme Ribonuclease ComplexFungal ProteinsGene DeletionMeiosisMetaphaseMitosisMolecular Sequence DataPolyadenylationPolynucleotide AdenylyltransferaseProtein Serine-Threonine KinasesCid14 protein, S pombeDIS3 protein, S cerevisiaedis3 protein, S pombeDNA-Directed DNA PolymeraseDNA-Directed RNA PolymerasesExoribonucleasesExosome Multienzyme Ribonuclease ComplexFungal ProteinsPAP2 protein, S cerevisiaePolynucleotide AdenylyltransferaseProtein Serine-Threonine Kinasesran1 protein, S pombeRNA, RibosomalRNA, ribosomal, 25SSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteins

Identifiers

PMID16478992
PMCPMC1430263
OpenAlexW2136402141

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.