Evidence map›Paper›PMID 16475007›Full record

ArticleTransgenic research2006

Homologous recombination in zebrafish ES cells.

Lianchun Fan, Jesung Moon, Jennifer Crodian, Paul Collodi

Abstract read
PubMed Publisher
In one paragraph

Article in Transgenic research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 65 citations in OpenAlex.

  1. Stage-Specific Effects of Ionizing Radiation during Early Development.International journal of molecular sciences · 2020
    Review
  2. Gene replacement by zinc finger nucleases in medaka embryos.Marine biotechnology (New York, N.Y.) · 2014
    Article
  3. Article
  4. Review
  5. Article
  6. Nanos3 gene targeting in medaka ES cells.International journal of biological sciences · 2013
    Article
  7. Article
  8. Review
  9. Fish stem cell cultures.International journal of biological sciences · 2011
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Fish ES cells and applications to biotechnology.Marine biotechnology (New York, N.Y.)
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lianchun FanDepartment of Animal Sciences, Purdue University, 125 S. Russell Street, West Lafayette, IN 47907, USA.
Jesung Moon
Jennifer Crodian
Paul Collodi
Purdue University West Lafayette · US

Funding

Zebrafish ES cell lines for targeted mutagenesisR01GM069384 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI COLLODI, PAUL · 2003 to 2010
$2.6M
NIGMS NIH HHS R01 GM069384
6 · The paper itself

Abstract

Targeted insertion of a plasmid by homologous recombination was demonstrated in zebrafish ES cell cultures. Two selection strategies were used to isolate ES cell colonies that contained targeted plasmid insertions in either the no tail or myostatin I gene. One selection strategy involved the manual isolation of targeted cell colonies that were identified by the loss of fluorescent protein gene expression. A second strategy used the diphtheria toxin A-chain gene in a positive-negative selection approach. Homologous recombination was confirmed by PCR, sequence and Southern blot analysis and colonies isolated using both selection methods were expanded and maintained for multiple passages. The results demonstrate that zebrafish ES cells have potential for use in a cell-mediated gene targeting approach.

Indexed as

AnimalsAnimals, Genetically ModifiedBrachyury ProteinCells, CulturedElectroporationEmbryonic Stem CellsEmbryo, NonmammalianFetal ProteinsGene TargetingMyostatinPlasmidsRecombination, GeneticT-Box Domain ProteinsZebrafishZebrafish ProteinsBrachyury ProteinFetal ProteinsMstnb protein, zebrafishMyostatinT-Box Domain ProteinsZebrafish Proteins

Identifiers

PMID16475007
OpenAlexW2084476178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.