Evidence map›Paper›PMID 16470700›Full record

ArticleAmerican journal of medical genetics. Part A2006

A 9-year-old male with a duplication of chromosome 3p25.3p26.2: clinical report and gene expression analysis.

Douglas C Bittel, Nataliya Kibiryeva, Majed Dasouki, Joan H M Knoll, Merlin G Butler

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. Whole genome microarray analysis of gene expression in subjects with fragile X syndrome.Genetics in medicine : official journal of the American College of Medical Genetics · 2007
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  12. How genetics works? An illustrative case report.Indian journal of ophthalmology · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Douglas C BittelChildren's Mercy Hospitals and Clinics, University of Missouri-Kansas City School of Medicine, Kansas City, Missouri 64108, USA.
Nataliya Kibiryeva
Majed Dasouki
Joan H M Knoll
Merlin G Butler
Children's Mercy Hospital · USSaint Luke's Hospital · USUniversity of Missouri–Kansas City · US

Funding

COMPULSIVE FOOD-SEEKING &FOOD MOTIVATION IN PWSR01HD041672 · NICHD · UNIVERSITY OF ROCHESTER · PI ZARCONE, JENNIFER R · 2001 to 2005
$1.2M
NICHD NIH HHS R01 HD041672NICHD NIH HHS R01HD41672
6 · The paper itself

Abstract

We describe a 9-year-old male referred for genetic evaluation for Prader-Willi syndrome (PWS). PWS is the most common genetically defined cause of life-threatening obesity and results from a functional loss of paternally expressed genes from the chromosome 15q11-q13 region. The patient presented with pervasive developmental disorder, delayed speech, and rapid onset of obesity at age 4 years, all features similar to PWS. However, chromosome 15q11-q13 methylation testing and fragile X studies were normal. GTG-banding and fluorescence in situ hybridization (FISH) with whole chromosome 3 paint probe (WCP3) and a chromosome 3p subtelomeric probe suggested a duplication of 3p25.3p26.2, a finding supported by comparative genomic hybridization (CGH). This region of chromosome 3p contains genes which contribute to obesity and behavioral problems, most notably, ghrelin (GHRL), an oxytocin receptor (OXTR), solute carrier family six members (gamma-aminobutyric acid (GABA) neurotransmitter transporters, SLC6A1 and SLC6A11), and peroxisome proliferator-activated receptor gamma (PPARG). To characterize these obesity and behavior related genes in our subject, we performed quantitative RT-PCR and compared expression levels with similarly aged male subjects (four non-obese males, four obese males, and four PWS males-two with 15q11-q13 deletions and two with maternal disomy 15). Our studies suggest increased expression of several genes in the 3p duplication region, including GHRL and PPARG, which may contribute to the phenotypic features in our 3p duplication subject.

Indexed as

Chromosome AberrationsChildChromosome BandingChromosomes, Human, Pair 3GABA Plasma Membrane Transport ProteinsGene DuplicationGene ExpressionGenome, HumanHumansIn Situ Hybridization, FluorescenceMaleNucleic Acid HybridizationPPAR gammaPrader-Willi SyndromeUp-RegulationGABA Plasma Membrane Transport ProteinsPPAR gammaSLC6A11 protein, humanSLC6A1 protein, human

Identifiers

PMID16470700
PMCPMC2568077
OpenAlexW2040622276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.