Evidence map›Paper›PMID 16467376›Full record

ArticleMolecular biology of the cell2006

Sp2 localizes to subnuclear foci associated with the nuclear matrix.

K Scott Moorefield, Haifeng Yin, Teresa D Nichols, Christopher Cathcart, Steven O Simmons, Jonathan M Horowitz

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

K Scott MoorefieldGraduate Program in Genomic Sciences, Center for Comparative Medicine and Translational Research, College of Veterinary Medicine, North Carolina State University, Raleigh, NC 27606, USA.
Haifeng Yin
Teresa D Nichols
Christopher Cathcart
Steven O Simmons
Jonathan M Horowitz
North Carolina State University · USNikon (United States) · US

Funding

TRAINING IN BIOCHEMICAL AND ENVIRONMENTAL TOXICOLOGYT32ES007046 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Seth William Kullman · 1985 to 2026
$5.1M
Regulation of Transcription and Cell Growth by Nkx3.1R01CA105313 · NCI · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI HOROWITZ, JONATHAN M · 2004 to 2008
$1.1M
Differential Functions of Sp-Family MembersR01GM065405 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI HOROWITZ, JONATHAN M · 2003 to 2006
$1.1M
NCI NIH HHS CA 105313NCI NIH HHS R01 CA105313NIEHS NIH HHS ES 07046NIEHS NIH HHS T32 ES007046NIGMS NIH HHS GM 065405NIGMS NIH HHS R01 GM065405
6 · The paper itself

Abstract

We have reported that extracts prepared from many human and mouse cell lines show little or no Sp2 DNA-binding activity and that Sp2 has little or no capacity to stimulate transcription of promoters that are activated by Sp1, Sp3, and Sp4. Using an array of chimeric Sp1/Sp2 proteins we showed further that Sp2 DNA-binding activity and trans-activation are each negatively regulated in mammalian cells. As part of an ongoing effort to study Sp2 function and regulation we characterized its subcellular localization in comparison with other Sp-family members in fixed and live cells. We report that 1) Sp2 localizes largely within subnuclear foci associated with the nuclear matrix, and 2) these foci are distinct from promyelocytic oncogenic domains and appear to be stable during an 18-h time course of observation. Deletion analyses identified a 37 amino acid sequence spanning the first zinc-"finger" that is sufficient to direct nuclear matrix association, and this region also encodes a bipartite nuclear localization sequence. A second nuclear matrix targeting sequence is encoded within the Sp2 trans-activation domain. We conclude that Sp2 preferentially associates with the nuclear matrix and speculate that this subcellular localization plays an important role in the regulation of Sp2 function.

Indexed as

Amino Acid SequenceAnimalsChlorocebus aethiopsCOS CellsHumansInterphaseMolecular Sequence DataNuclear MatrixProtein Array AnalysisProtein Structure, TertiarySequence DeletionSp2 Transcription FactorSp Transcription FactorsTransfectionZinc FingersSp2 Transcription FactorSp Transcription Factors

Identifiers

PMID16467376
PMCPMC1415311
OpenAlexW2143067946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.