Evidence map›Paper›PMID 16465595›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2006

Comparative phylogenetic analysis reveals multiple non-imprinted isoforms of opossum Dlk1.

Jennifer R Weidman, Kristin A Maloney, Randy L Jirtle

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The origin and evolution of genomic imprinting and viviparity in mammals.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Imprinting evolution and human health.Mammalian genome : official journal of the International Mammalian Genome Society
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Jennifer R WeidmanDepartment of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA.
Kristin A Maloney
Randy L Jirtle
Duke Medical Center · USDuke University · USDuke University Hospital · US

Funding

TUMOR SUPPRESSOR FUNCTION OF THE M6P/IGF2 RECEPTORR01ES008823 · NIEHS · DUKE UNIVERSITY · PI JIRTLE, RANDY L · 1997 to 2007
$2.2M
SURVIVAL AND CARCINOGENESIS IN TRANSPLANTED HEPATOCYTESR01CA025951 · NCI · DUKE UNIVERSITY · PI JIRTLE, RANDY L · 1985 to 2004
$1.4M
Dietary Supplements, Imprint Gene Expression and CancerR21ES013053 · NIEHS · DUKE UNIVERSITY · PI JIRTLE, RANDY L · 2004 to 2006
$458k
NCI NIH HHS CA25951NIEHS NIH HHS ES08823NIEHS NIH HHS ES13053
6 · The paper itself

Abstract

Imprinted genes are monoallelically expressed in a parent-of-origin manner and were previously identified in both marsupials and eutherians, but not in monotremes. Phylogenetic comparison of imprinted domains is a powerful tool for investigating the molecular and adaptive evolution of this unique gene regulatory mechanism. Herein, we report that multiple transcripts of Dlk1 (Delta, Drosophila, Homolog-like 1) are expressed in the opossum, but none are imprinted. Thus, we provide the first example of a reciprocally imprinted gene domain in which imprinting evolved in a common ancestor to eutherian rather than therian mammals. Moreover, the reciprocally imprinted Meg3 (Maternally Expressed Gene 3), found downstream of Dlk1 in eutherian mammals, is absent in the opossum. We propose that the Meg3 sequence integrated into the eutherian Dlk1 domain via a LINE-1 element and that Dlk1 became imprinted in eutherian mammals only after this downstream integration. These findings clearly demonstrate that imprinted genes did not all evolve before the divergence of marsupials and eutherians.

Indexed as

GenomeGenomic ImprintingPhylogenyAnimalsEvolution, MolecularInsulin-Like Growth Factor IIIntercellular Signaling Peptides and ProteinsMembrane ProteinsOpossumsOrgan SpecificityProtein IsoformsProteinsProtein Structure, TertiaryRepressor ProteinsIGF2 protein, humanInsulin-Like Growth Factor IIIntercellular Signaling Peptides and ProteinsMembrane ProteinsProtein IsoformsProteinsRepressor Proteins

Identifiers

PMID16465595
OpenAlexW2060679900

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.