Evidence map›Paper›PMID 16463102›Full record

ArticlePlant molecular biology2006

The maize Oil yellow1 (Oy1) gene encodes the I subunit of magnesium chelatase.

Ruairidh J H Sawers, Joanne Viney, Phyllis R Farmer, Rhiannon R Bussey, Gregory Olsefski, Katya Anufrikova, C Neil Hunter, Thomas P Brutnell

Abstract read
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In one paragraph

Article in Plant molecular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 102 citations in OpenAlex.

  1. Map-based cloning and functional validation of ClChlH governing yellow rind color in watermelon (Citrullus lanatus).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  15. Single Nucleotide Mutagenesis of theFrontiers in plant science · 2020
    Article
  16. Article
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  18. AG3 (Bethesda, Md.) · 2019
    Article
  19. Article
  20. Candidate Genes for Yellow Leaf Color in Common Wheat (International journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Ruairidh J H SawersBoyce Thompson Institute, Cornell University, Tower Road, Ithaca, NY 14853, USA.
Joanne Viney
Phyllis R Farmer
Rhiannon R Bussey
Gregory Olsefski
Katya Anufrikova
C Neil Hunter
Thomas P Brutnell
Cornell University · USUniversity of Sheffield · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Semi-dominant Oil yellow1 (Oy1) mutants of maize (Zea mays) are deficient in the conversion of protoporphyrin IX to magnesium protoporphyrin IX, the first committed step of chlorophyll biosynthesis. Using a candidate gene approach, a cDNA clone was isolated that was predicted to encode the I subunit of magnesium chelatase (ZmCHLI) and mapped to the same genetic interval as Oy1. Allelic variation was identified at ZmCHLI between wild-type plants and plants carrying semi-dominant alleles of Oy1. These differences revealed putative amino acid substitutions that could account for the alterations in protein function. Candidate lesions were tested by introduction of homologous changes into the Synechocystis magnesium chelatase I gene (SschlI) and characterization of the activity of mutant protein variants in an in vitro enzyme activity assay. The results of these analyses suggest that SsChlI protein variants containing the substitutions identified in the dominant Oy1 maize alleles lack activity necessary for magnesium chelation and confer a semi-dominant phenotype via competitive inhibition of wild-type SsChlI.

Indexed as

Amino Acid SequenceCloning, MolecularGenetic LinkageLyasesMagnesiumMolecular Sequence DataMutationPlant LeavesPolymorphism, GeneticProtein SubunitsSequence AlignmentSequence Homology, Amino AcidZea maysLyasesMagnesiummagnesium chelataseProtein Subunits

Identifiers

PMID16463102
OpenAlexW2069777315

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.