Evidence map›Paper›PMID 16463024›Full record

ArticleHuman genetics2006

The TNFalpha receptor TNFRSF1A and genes encoding the amiloride-sensitive sodium channel ENaC as modulators in cystic fibrosis.

Frauke Stanke, Tim Becker, Harry Cuppens, Vinod Kumar, Jean-Jacques Cassiman, Silke Jansen, Dragica Radojkovic, Benny Siebert, Jennifer Yarden, David W Ussery and 2 more

Abstract read
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In one paragraph

Article in Human genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Frauke StankeDepartment of Pediatrics, OE6711, Hannover Medical School, Carl-Neuberg-Str. 1, 30625, Hannover, Germany. mekus.frauke@mh-hannover.de
Tim Becker
Harry Cuppens
Vinod Kumar
Jean-Jacques Cassiman
Silke Jansen
Dragica Radojkovic
Benny Siebert
Jennifer Yarden
David W Ussery
Thomas F Wienker
Burkhard Tümmler
Medizinische Hochschule Hannover · DEKU Leuven · BEInstitut für Medizinische Biometrie, Informatik und Epidemiologie · DETechnical University of Denmark · DKUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CFTR mutations in cystic fibrosis (CF) lead to ion transport anomalities which predispose to chronic infection and inflammation of CF airways as the major determinants for morbidity and mortality in CF. Discordant clinical phenotypes of siblings with identical CFTR mutations and the large variability of clinical manifestations of patients who are homozygous for the most common mutation F508del suggest that both environment and genes other than CFTR contribute substantially to CF disease. The prime candidates for genetic modifiers in CF are elements of host defence such as the TNFalpha receptor and of ion transport such as the amiloride-sensitive epithelial sodium channel ENaC, both of which are encoded side by side on 12p13 (TNFRSF1A, SCNN1A) and 16p12 (SCNN1B, SCNN1G). Thirty-seven families with F508del-CFTR homozygous siblings exhibiting extreme clinical phenotypes that had been selected from the 467 pairs of the European CF Twin and Sibling Study were genotyped at 12p13 and 16p12 markers. The ENaC was identified as a modulator of CF by transmission disequilibrium at SCNN1G and association with CF phenotype intrapair discordance at SCNN1B. Family-based and case-control analyses and sequencing of SCNN1A and TNFRSF1A uncovered an association of the TNFRSF1A intron 1 haplotype with disease severity. Carriers of risk haplotypes were underrepresented suggesting a strong impact of both loci on survival. The finding that TNFRSF1A, SCNN1B and SCNN1G are clinically relevant modulators of CF disease supports current concepts that the depletion of airway surface liquid and inadequate host inflammatory responses trigger pulmonary disease in CF.

Indexed as

AdolescentAdultChromosomes, Human, Pair 12Chromosomes, Human, Pair 16Cystic FibrosisEpithelial Sodium ChannelsFamilyFemaleGene FrequencyHaplotypesHumansLinkage DisequilibriumMaleMiddle AgedReceptors, Tumor Necrosis Factor, Type ISequence Analysis, DNAEpithelial Sodium ChannelsReceptors, Tumor Necrosis Factor, Type ISCNN1A protein, humanTNFRSF1A protein, human

Identifiers

PMID16463024
OpenAlexW2033293714

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.