Evidence map›Paper›PMID 16461705›Full record

ArticleApplied and environmental microbiology2006

In vivo functional assay of a recombinant aquaporin in Pichia pastoris.

Mark J Daniels, Malcolm R Wood, Mark Yeager

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Mark J DanielsDepartment of Cell Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Malcolm R Wood
Mark Yeager
Scripps Research Institute · USScripps Clinic · US

Funding

Structure and Dynamics of Gap Junction ChannelsR01HL048908 · NHLBI · UNIVERSITY OF VIRGINIA · PI YEAGER, MARK JAY · 1994 to 2013
$5.1M
Structure Analysis of Aquaporin Membrane ChannelsR01GM065399 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI YEAGER, MARK JAY · 2003 to 2006
$1.4M
STRUCTURE OF THE EYE LENS COMMUNICATING CHANNELF32EY006906 · NEI · SCRIPPS RESEARCH INSTITUTE · PI DANIELS, MARK J · 1998 to 2000
$39k
NEI NIH HHS EY 06906NEI NIH HHS F32 EY006906NHLBI NIH HHS R01 HL048908NHLBI NIH HHS R01 HL48908NIGMS NIH HHS R01 GM065399NIGMS NIH HHS R01 GM65399
6 · The paper itself

Abstract

The water channel protein PvTIP3;1 (alpha-TIP) is a member of the major intrinsic protein (MIP) membrane channel family. We overexpressed this eukaryotic aquaporin in the methylotrophic yeast Pichia pastoris, and immunogold labeling of cellular cryosections showed that the protein accumulated in the plasma membrane, as well as vacuolar and other intracellular membranes. We then developed an in vivo functional assay for water channel activity that measures the change in optical absorbance of spheroplasts following an osmotic shock. Spheroplasts of wild-type P. pastoris displayed a linear relationship between absorbance and osmotic shock level. However, spheroplasts of P. pastoris expressing PvTIP3;1 showed a break in this linear relationship corresponding to hypo-osmotically induced lysis. It is the difference between control and transformed spheroplasts under conditions of hypo-osmotic shock that forms the basis of our aquaporin activity assay. The aquaporin inhibitor mercury chloride blocked water channel activity but had no effect on wild-type yeast. Osmotically shocked yeast cells were affected only slightly by expression of the Escherichia coli glycerol channel GlpF, which belongs to the MIP family but is a weak water channel. The important role that aquaporins play in human physiology has led to a growing interest in their potential as drug targets for treatment of hypertension and congestive heart failure, as well as other fluid overload states. The simplicity of this assay that is specific for water channel activity should enable rapid screening for compounds that modulate water channel activity.

Indexed as

AquaporinsBase SequenceDNA, ComplementaryDrug DesignEscherichia coliEscherichia coli ProteinsHumansOsmotic PressurePichiaPlant ProteinsRecombinant ProteinsSpheroplastsAquaporinsDNA, ComplementaryEscherichia coli ProteinsGlpF protein, E coliPlant ProteinsRecombinant Proteins

Identifiers

PMID16461705
PMCPMC1392912
OpenAlexW2076673283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.