Evidence map›Paper›PMID 16455904›Full record

ArticleJournal of clinical microbiology2006

Multilocus microsatellite typing as a new tool for discrimination of Leishmania infantum MON-1 strains.

Sebastian Ochsenreither, Katrin Kuhls, Matthias Schaar, Wolfgang Presber, Gabriele Schönian

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Genetic Diversity and Population Structure ofPathogens (Basel, Switzerland) · 2023
    Article
  3. Microorganisms · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Analysis of genetic polymorphisms and tropism in East African Leishmania donovani by Amplified Fragment Length Polymorphism and kDNA minicircle sequencing.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2018
    Article
  9. Article
  10. Article
  11. Population Structure ofBioMed research international · 2018
    Article
  12. Variability of Cutaneous Leishmaniasis Lesions Is Not Associated with Genetic Diversity ofThe American journal of tropical medicine and hygiene · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sebastian OchsenreitherInstitute of Microbiology and Hygiene, Charité Universitätsmedizin Berlin, Dorotheenstr. 96, 10117 Berlin, Germany.
Katrin Kuhls
Matthias Schaar
Wolfgang Presber
Gabriele Schönian

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Leishmania donovani complex, which consists of L. donovani, L. infantum-L. chagasi, and L. archibaldi, is responsible for visceral manifestations of leishmaniasis. Multilocus enzyme electrophoresis is the standard method for the characterization and identification of strains of Leishmania. For L. infantum, the predominance of zymodeme MON-1 significantly reduces the discriminative power of this approach. In the present study, we developed 17 independent polymorphic microsatellite markers for the typing of strains of L. infantum, with the main emphasis on zymodeme MON-1. The discriminative powers of 11 markers selected from among these markers were tested by using a panel of 63 isolates of the L. donovani complex. Unique multilocus genotypes were observed for the strains analyzed, with only three exceptions. Model-based and distance-based analyses of the data set showed comparable results. It was possible to discriminate between L. donovani sensu stricto, a non-MON-1 group of L. infantum isolates, and a MON-1 group of L. infantum isolates. Within MON-1, three clusters with geographical correlations became apparent. The frequency of heterozygosity in the alleles analyzed varied extremely between the different groups of isolates. The main clusters described are not consistent with species definitions based on isoenzyme analysis but confirm the results of former PCR-based investigations.

Indexed as

AnimalsDNA, ProtozoanGenetic MarkersGenetic VariationHumansIsoenzymesLeishmania infantumMicrosatellite RepeatsMolecular Sequence DataParasitologySequence Analysis, DNADNA, ProtozoanGenetic MarkersIsoenzymes

Identifiers

PMID16455904
PMCPMC1392658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.