Evidence map›Paper›PMID 16453064›Full record

ArticleThe European physical journal. E, Soft matter2006

The nucleosome: a transparent, slippery, sticky and yet stable DNA-protein complex.

H Schiessel

Abstract read
PubMed Publisher
In one paragraph

Article in The European physical journal. E, Soft matter, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Modulation of toll-like receptor signaling by antimicrobial peptides.Seminars in cell & developmental biology · 2019
    Review
  3. Review
  4. Anomalously Rapid Hydration Water Diffusion Dynamics Near DNA Surfaces.Journal of the American Chemical Society · 2015
    Article
  5. Article
  6. Rigid-body molecular dynamics of DNA inside a nucleosome.The European physical journal. E, Soft matter · 2013
    Article
  7. Review
  8. Article
  9. Mechanisms of ATP-dependent nucleosome sliding.Current opinion in structural biology · 2010
    Review
  10. Article
  11. The homology recognition well as an innate property of DNA structure.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Polymer chain models of DNA and chromatin.The European physical journal. E, Soft matter · 2006
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author.

H SchiesselInstituut-Lorentz, Universiteit Leiden, Postbus 9506, 2300 RA, Leiden, The Netherlands. schiessel@lorentz.leidenuniv.nl

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Roughly three quarters of eucaryotic DNA are tightly wrapped onto protein cylinders organized in so-called nucleosomes. Despite this fact, the wrapped DNA cannot be inert since DNA is at the heart of many crucial life processes. We focus here on physical mechanisms that might allow nucleosomes to perform a great deal of such processes, specifically 1) on unwrapping fluctuations that give DNA-binding proteins access to the wrapped DNA portions without disrupting the nucleosome as a whole, 2) on corkscrew sliding along DNA and some implications and on 3) tail-bridging-induced attraction between nucleosomes as a means of controlling higher-order folding.

Indexed as

Base SequenceBinding SitesDNAKineticsModels, MolecularNuclear ProteinsNucleosomesDNANuclear ProteinsNucleosomes

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.