Evidence map›Paper›PMID 16452623›Full record

ArticleProtein science : a publication of the Protein Society2006

Global structural rearrangement of the cell penetrating ribonuclease colicin E3 on interaction with phospholipid membranes.

Khédidja Mosbahi, Daniel Walker, Richard James, Geoffrey R Moore, Colin Kleanthous

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  3. Review
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  8. Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
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  12. Article
  13. Article
  14. Article
  15. Review
  16. Colicin biology.Microbiology and molecular biology reviews : MMBR · 2007
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Khédidja MosbahiDepartment of Biology, University of York, York YO10 5YW, UK.
Daniel Walker
Richard James
Geoffrey R Moore
Colin Kleanthous
University of York · GBUniversity of East Anglia · GBUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C516236/1Wellcome Trust
6 · The paper itself

Abstract

Nuclease type colicins and related bacteriocins possess the unprecedented ability to translocate an enzymatic polypeptide chain across the Gram-negative cell envelope. Here we use the rRNase domain of the cytotoxic ribonuclease colicin E3 to examine the structural changes on its interaction with the membrane. Using phospholipid vesicles as model membranes we show that anionic membranes destabilize the nuclease domain of the rRNase type colicin E3. Intrinsic tryptophan fluorescence and circular dichroism show that vesicles consisting of pure DOPA act as a powerful protein denaturant toward the rRNase domain, although this interaction can be entirely prevented by the addition of salt. Binding of E3 rRNase to DOPA vesicles is an endothermic process (DeltaH=24 kcal mol-1), reflecting unfolding of the protein. Consistent with this, binding of a highly destabilized mutant of the E3 rRNase to DOPA vesicles is exothermic. With mixed vesicles containing anionic and neutral phospholipids at a ratio of 1:3, set to mimic the charge of the Escherichia coli inner membrane, destabilization of E3 rRNase is lessened, although the melting temperature of the protein at pH 7.0 is greatly reduced from 50 degrees C to 30 degrees C. The interaction of E3 rRNase with 1:3 DOPA:DOPC vesicles is also highly dependent on both ionic strength and temperature. We discuss these results in terms of the likely interaction of the E3 rRNase and the related E9 DNase domains with the E. coli inner membrane and their subsequent translocation to the cell cytoplasm.

Indexed as

AnionsCalorimetryCircular DichroismColicinsOsmolar ConcentrationPhospholipidsProtein BindingProtein DenaturationProtein Structure, TertiaryProtein TransportRibonucleasesStatic ElectricityThermodynamicsAnionsColicinsPhospholipidsRibonucleases

Identifiers

PMID16452623
PMCPMC2249781
OpenAlexW2078876229

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.