Evidence map›Paper›PMID 16452405›Full record

ArticleJournal of bacteriology2006

Nickel represses the synthesis of the nickel permease NixA of Helicobacter pylori.

Lutz Wolfram, Elvira Haas, Peter Bauerfeind

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 52 citations in OpenAlex.

  1. Therapeutic suppression ofFrontiers in microbiology · 2026
    Article
  2. Insights into the Orchestration of Gene Transcription Regulators inInternational journal of molecular sciences · 2022
    Review
  3. The Effects of Vitamins and Micronutrients onJournal of immunology research · 2022
    Review
  4. Acid-responsive activity of theProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  5. Article
  6. Article
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  8. On the interaction of Helicobacter pylori NikR, a Ni(II)-responsive transcription factor, with the urease operator: in solution and in silico studies.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2015
    Article
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  10. Review
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  16. Review
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  19. Nickel-binding and accessory proteins facilitating Ni-enzyme maturation in Helicobacter pylori.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2007
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lutz WolframDepartment of Internal Medicine, Division of Gastroenterology, University Hospital of Zurich, Raemistr. 100, CH-8091 Zurich, Switzerland.
Elvira Haas
Peter Bauerfeind
University Hospital of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nickel acquisition is necessary for urease activity, a major virulence factor of the human gastric pathogen Helicobacter pylori. NixA was identified as a specific nickel uptake system in this organism. Addition of small amounts of nickel to media strongly stimulates urea hydrolysis. On the other hand, high nickel concentrations are deleterious to cell growth. As a possible protective reaction, nickel uptake seems to be reduced in H. pylori grown in nickel-rich media. These observations led to investigations of regulation of the expression of the nickel permease NixA. We found that increasing the nickel concentration in media reduced the amount of NixA. In order to address the question of whether this phenomenon was subject to transcriptional or translational regulation, we quantified nixA mRNA from H. pylori by real-time PCR. The amount of nixA mRNA was gradually reduced five- to sevenfold in a time- and concentration-dependent manner. Repression could be measured as soon as 5 min after nickel addition, and the maximum repression occurred after 20 to 30 min. The maximum repression was obtained with an external nickel concentration of 100 microM. The observed nickel repression of NixA was dependent on nikR encoding the nickel-responsive regulatory protein NikR. In conclusion, we demonstrated that synthesis of the NixA nickel permease of H. pylori shows nickel-responsive regulation mediated by NikR to maintain the balance between effective nickel acquisition and a toxic overload.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBiological TransportCation Transport ProteinsDose-Response Relationship, DrugDown-RegulationEscherichia coli ProteinsHelicobacter pyloriNickelPolymerase Chain ReactionRepressor ProteinsRNA, BacterialRNA, MessengerTime FactorsBacterial ProteinsCation Transport ProteinsEscherichia coli ProteinsNickelnickel chlorideNikR protein, E coliNixA protein, Helicobacter pyloriRepressor ProteinsRNA, BacterialRNA, Messenger

Identifiers

PMID16452405
PMCPMC1367240
OpenAlexW2110334125

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.