Evidence map›Paper›PMID 16452301›Full record

ArticleNucleic acids research2006

Structure of the Tetrahymena thermophila telomerase RNA helix II template boundary element.

Rebecca J Richards, Carla A Theimer, L David Finger, Juli Feigon

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Structural Biology of Telomerase.Cold Spring Harbor perspectives in biology · 2019
    Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Progress in structural studies of telomerase.Current opinion in structural biology · 2014
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Single-molecule analysis of telomerase structure and function.Current opinion in chemical biology · 2011
    Review
  17. Ribonucleoprotein multimers and their functions.Critical reviews in biochemistry and molecular biology · 2010
    Review
  18. The telomerase database.Nucleic acids research · 2008
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rebecca J RichardsDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095-1569, USA.
Carla A Theimer
L David Finger
Juli Feigon
University of California, Los Angeles · US

Funding

STRUCTURE OF TELOMERIC DNA OLIGONUCLEOTIDESR01GM048123 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FEIGON, JULI · 1992 to 2018
$6.4M
NIGMS NIH HHS GM048123NIGMS NIH HHS R01 GM048123
6 · The paper itself

Abstract

Telomere addition by telomerase requires an internal templating sequence located in the RNA subunit of telomerase. The correct boundary definition of this template sequence is essential for the proper addition of the nucleotide repeats. Incorporation of incorrect telomeric repeats onto the ends of chromosomes has been shown to induce chromosomal instability in ciliate, yeast and human cells. A 5' template boundary defining element (TBE) has been identified in human, yeast and ciliate telomerase RNAs. Here, we report the solution structure of the TBE element (helix II) from Tetrahymena thermophila telomerase RNA. Our results indicate that helix II and its capping pentaloop form a well-defined structure including unpaired, stacked adenine nucleotides in the stem and an unusual syn adenine nucleotide in the loop. A comparison of the T.thermophila helix II pentaloop with a pentaloop of the same sequence found in the 23S rRNA of the Haloarcula marismortui ribosome suggests possible RNA and/or protein interactions for the helix II loop within the Tetrahymena telomerase holoenzyme.

Indexed as

Models, MolecularAnimalsBase SequenceConserved SequenceMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularNucleic Acid ConformationRegulatory Sequences, Ribonucleic AcidRNATelomeraseTemplates, GeneticTetrahymena thermophilaRegulatory Sequences, Ribonucleic AcidRNATelomerasetelomerase RNA

Identifiers

PMID16452301
PMCPMC1360744
OpenAlexW2154503882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.