Evidence map›Paper›PMID 16450065›Full record

ArticleCurrent microbiology2006

Isolation and characterization of a cold-active xylanase enzyme from Flavobacterium sp.

Charles C Lee, Michael Smith, Rena E Kibblewhite-Accinelli, Tina G Williams, Kurt Wagschal, George H Robertson, Dominic W S Wong

Abstract read
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In one paragraph

Article in Current microbiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 49 citations in OpenAlex.

  1. Molecular and Biochemical Characterization of Xylanase Produced byJournal of microbiology and biotechnology · 2024
    Article
  2. Article
  3. Comparative Genomic Analysis of AgarolyticInternational journal of molecular sciences · 2022
    Article
  4. Article
  5. Review
  6. Characterization of a novel cold-active xylanase from Luteimonas species.World journal of microbiology & biotechnology · 2018
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Charles C LeeUnited States Department of Agriculture, Agricultural Research Service, Western Regional Research Center, 800 Buchanan St., Albany, CA 94710, USA. clee@pw.usda.gov
Michael Smith
Rena E Kibblewhite-Accinelli
Tina G Williams
Kurt Wagschal
George H Robertson
Dominic W S Wong
United States Department of Agriculture · USWestern Regional Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xylan is the major component of hemicellulose, and xylan should be fully utilized to improve the efficiencies of a biobased economy. There are a variety of industrial reaction conditions in which an active xylanase enzyme would be desired. As a result, xylanase enzymes with different activity profiles are of great interest. We isolated a xylanase gene (xyn10) from a Flavobacterium sp. whose sequence suggests that it is a glycosyl hydrolase family 10 member. The enzyme has a temperature optimum of 30 degrees C, is active at cold temperatures, and is thermolabile. The enzyme has an apparent Km of 1.8 mg/ml and kcat of 100 sec-1 for beechwood xylan, attacks highly branched native xylan substrates, and does not have activity against glucans.

Indexed as

Amino Acid SequenceBacterial ProteinsEndo-1,4-beta XylanasesFlavobacteriumGenes, BacterialHydrogen-Ion ConcentrationMolecular Sequence DataSequence AlignmentSoil MicrobiologyTemperatureBacterial ProteinsEndo-1,4-beta Xylanases

Identifiers

PMID16450065
OpenAlexW2021933630

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.