Evidence map›Paper›PMID 16449644›Full record

ArticleMolecular and cellular biology2006

Selective repression of low-density lipoprotein receptor expression by SP600125: coupling of histone H3-Ser10 phosphorylation and Sp1 occupancy.

Wei Huang, Sanjay Batra, Sasi Korrapati, V Mishra, Kamal D Mehta

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  7. Histone modifications induced by a family of bacterial toxins.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wei HuangDepartment of Molecular and Cellular Biochemistry, The Ohio State University College of Medicine and Public Health, and The Dorothy M. Davis Heart and Lung Research Institute, Columbus, OH 43210, USA.
Sanjay Batra
Sasi Korrapati
V Mishra
Kamal D Mehta
The Ohio State University · US

Funding

Mechanisms of p42/44MAPK-induced LDL receptor expressionR01HL065540 · NHLBI · OHIO STATE UNIVERSITY · PI MEHTA, KAMAL D · 2001 to 2004
$1.1M
NHLBI NIH HHS HL-60000355NHLBI NIH HHS HL-742202NHLBI NIH HHS R01 HL065540
6 · The paper itself

Abstract

In this study, we show that exposure of human hepatocellular HepG2 cells to SP600125 rapidly and dramatically reduced global histone H3-Ser10 phosphorylation, without significantly affecting the global acetylation of neighboring lysines. The loss of phosphorylation is not due to changes in cell cycle distribution and/or apoptosis and is mediated independent of either p46/54(JNK) or MSK-1/2 inhibition. Moreover, SP600125 repressed the basal expression of the endogenous LDL receptor in a gene-specific manner, whereas the expression of squalene synthase, sterol response element-binding protein-1, and beta-actin was not altered by SP600125. Finally, chromatin immunoprecipitation and in vivo footprinting assays provided direct evidence that localized histone H3-Ser10 dephosphorylation at the low-density lipoprotein receptor promoter was associated with a significant decrease in the occupancy of the Sp1 binding site, with a slight reduction in the occupancy of RNA polymerase II. Together, our findings show that SP600125 is an efficient inhibitor of histone H3-Ser10 phosphorylation in vivo, and our results led us to hypothesize that this modification plays a novel role in regulating transcriptional control by modulating promoter accessibility to maintain basal expression in a gene-specific manner.

Indexed as

AnthracenesBase SequenceBinding SitesCell CycleCell LineDNAExtracellular Signal-Regulated MAP KinasesGene ExpressionHistonesHumansModels, BiologicalPhosphorylationPromoter Regions, GeneticReceptors, LDLSerineSp1 Transcription FactorAnthracenesDNAExtracellular Signal-Regulated MAP KinasesHistonespyrazolanthroneReceptors, LDLSerineSp1 Transcription Factor

Identifiers

PMID16449644
PMCPMC1367207
OpenAlexW2101171322

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.