Evidence map›Paper›PMID 16449640›Full record

ArticleMolecular and cellular biology2006

Chromatin decondensation and nuclear reprogramming by nucleoplasmin.

Hiroshi Tamada, Nguyen Van Thuan, Peter Reed, Dominic Nelson, Nobuko Katoku-Kikyo, Justin Wudel, Teruhiko Wakayama, Nobuaki Kikyo

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 119 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Hiroshi TamadaStem Cell Institute, Division of Hematology, Oncology and Transplantation, Department of Medicine, University of Minnesota, MMC 716, 420 Delaware St. SE, Minneapolis, MN 55455, USA.
Nguyen Van Thuan
Peter Reed
Dominic Nelson
Nobuko Katoku-Kikyo
Justin Wudel
Teruhiko Wakayama
Nobuaki Kikyo
University of Minnesota · USUniversity of Minnesota System · US

Funding

Reversible disassembly of the nucleolus by FRGY proteinsR01GM068027 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI KIKYO, NOBUAKI · 2003 to 2007
$1.7M
NIGMS NIH HHS GM068027NIGMS NIH HHS R01 GM068027
6 · The paper itself

Abstract

Somatic cell nuclear cloning has repeatedly demonstrated striking reversibility of epigenetic regulation of cell differentiation. Upon injection into eggs, the donor nuclei exhibit global chromatin decondensation, which might contribute to reprogramming the nuclei by derepressing dormant genes. Decondensation of sperm chromatin in eggs is explained by the replacement of sperm-specific histone variants with egg-type histones by the egg protein nucleoplasmin (Npm). However, little is known about the mechanisms of chromatin decondensation in somatic nuclei that do not contain condensation-specific histone variants. Here we found that Npm could widely decondense chromatin in undifferentiated mouse cells without overt histone exchanges but with specific epigenetic modifications that are relevant to open chromatin structure. These modifications included nucleus-wide multiple histone H3 phosphorylation, acetylation of Lys 14 in histone H3, and release of heterochromatin proteins HP1beta and TIF1beta from the nuclei. The protein kinase inhibitor staurosporine inhibited chromatin decondensation and these epigenetic modifications with the exception of H3 acetylation, potentially linking these chromatin events. At the functional level, Npm pretreatment of mouse nuclei facilitated activation of four oocyte-specific genes from the nuclei injected into Xenopus laevis oocytes. Future molecular elucidation of chromatin decondensation by Npm will significantly contribute to our understanding of the plasticity of cell differentiation.

Indexed as

AnimalsBase SequenceCell DifferentiationCell NucleusChromatinChromatin Assembly and DisassemblyCloning, OrganismDNAEpigenesis, GeneticFemaleHeterochromatinHistonesIn Vitro TechniquesMaleMiceModels, BiologicalChromatinDNAHeterochromatinHistonesNuclear ProteinsNucleoplasminsPhosphoproteinsXenopus Proteins

Identifiers

PMID16449640
PMCPMC1367201
OpenAlexW2117002777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.