Evidence map›Paper›PMID 16443651›Full record

ArticleBiophysical journal2006

Dynamics of the emission spectrum of a single LH2 complex: interplay of slow and fast nuclear motions.

Vladimir I Novoderezhkin, Danielis Rutkauskas, Rienk van Grondelle

Abstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Simple Quantum Dynamics with Thermalization.The journal of physical chemistry. A · 2018
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Photosynthetic light harvesting: excitons and coherence.Journal of the Royal Society, Interface · 2014
    Review
  13. Single-molecule spectroscopy reveals photosynthetic LH2 complexes switch between emissive states.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  14. How Quantum Coherence Assists Photosynthetic Light Harvesting.The journal of physical chemistry letters · 2012
    Article
  15. Article
  16. Article
  17. Förster energy transfer theory as reflected in the structures of photosynthetic light-harvesting systems.Chemphyschem : a European journal of chemical physics and physical chemistry · 2011
    Review
  18. Article
  19. Light harvesting complex II B850 excitation dynamics.The Journal of chemical physics · 2009
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Vladimir I NovoderezhkinA. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, 119992 Moscow, Russia.
Danielis Rutkauskas
Rienk van Grondelle

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have studied the relationship between the realizations of static disorder and the emission spectra observed for a single LH2 complex. We show that the experimentally observed spectral fluctuations reflect realizations of the disorder in the B850 ring associated with different degrees of exciton delocalization and different effective coupling of the excitons to phonon modes. The main spectral features cannot be explained using models with correlated disorder associated with elliptical deformations of the ring. A quantitative explanation of the measured single-molecule spectra is obtained using the modified Redfield theory and a model of the B850 ring with uncorrelated disorder of the site energies. The positions and spectral shapes of the main exciton components in this model are determined by the disorder-induced shift of exciton eigenvalues in combination with phonon-induced effects (i.e., reorganization shift and broadening, that increase in proportion to the inverse delocalization length of the exciton state). Being dependent on the realization of the disorder, these factors produce different forms of the emission profile. In addition, the different degree of delocalization and effective couplings to phonons determines a different type of excitation dynamics for each of these realizations. We demonstrate that experimentally observed quasistable conformational states are characterized by excitation energy transfer regimes varying from a coherent wavelike motion of a delocalized exciton (with a 100-fs pass over half of the ring) to a hopping-type motion of the wavepacket (with a 350-fs jump between separated groups of 3-4 molecules) and self-trapped excitations that do not move from their localization site.

Indexed as

Energy TransferModels, BiologicalBacterial ProteinsLight-Harvesting Protein ComplexesMotionRhodopseudomonasB800-850 light-harvesting complex, bacteriaBacterial ProteinsLight-Harvesting Protein Complexes

Identifiers

PMID16443651
PMCPMC1414546

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.