Evidence map›Paper›PMID 16440369›Full record

ArticleHepatology (Baltimore, Md.)2006

C/EBPalpha and HNF6 protein complex formation stimulates HNF6-dependent transcription by CBP coactivator recruitment in HepG2 cells.

Yuichi Yoshida, Douglas E Hughes, Francisco M Rausa, Il-Man Kim, Yongjun Tan, Gretchen J Darlington, Robert H Costa

Open access · bronzeAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Epithelial Morphogenesis during Liver Development.Cold Spring Harbor perspectives in biology · 2017
    Review
  3. Article
  4. Article
  5. Onecut transcription factors in development and disease.Trends in developmental biology · 2016
    Article
  6. Article
  7. Article
  8. Article
  9. Dysregulation of the C/EBPalpha differentiation pathway in human cancer.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2009
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuichi YoshidaDepartment of Biochemistry and Molecular Genetics, University of Illinois at Chicago, College of Medicine, Chicago, IL 60607-7170, USA.
Douglas E Hughes
Francisco M Rausa
Il-Man Kim
Yongjun Tan
Gretchen J Darlington
Robert H Costa
University of Illinois Chicago · USBaylor College of Medicine · US

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
REGULATION OF TRANSTHYRETIN IN THE LIVERR01GM043241 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI RAYCHAUDHURI, PRADIP · 1990 to 2006
$2.2M
C/EBP ALPHA REGULATION OF ACUTE PHASE RESPONSE IN VIVOR01DK053045 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI DARLINGTON, GRETCHEN J. · 1997 to 2004
$1.4M
NIDDK NIH HHS DK53045NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30 DK56338NIDDK NIH HHS R01 DK053045NIGMS NIH HHS R01 GM043241NIGMS NIH HHS R01 GM043241-15NIGMS NIH HHS R01 GM043241-16NIGMS NIH HHS R01 GM43241
6 · The paper itself

Abstract

We previously demonstrated that formation of complexes between the DNA-binding domains of hepatocyte nuclear factor 6 (HNF6) and forkhead box a2 (Foxa2) proteins stimulated Foxa2 transcriptional activity. Here, we used HepG2 cell cotransfection assays to demonstrate that HNF6 transcriptional activity was stimulated by CCAAT/enhancer-binding protein alpha (C/EBPalpha), but not by the related C/EBPbeta or C/EBPdelta proteins. Formation of the C/EBPalpha-HNF6 protein complex required the HNF6 cut domain and the C/EBPalpha activation domain (AD) 1/AD2 sequences. This C/EBPalpha-HNF6 transcriptional synergy required both the N-terminal HNF6 polyhistidine and serine/threonine/proline box sequences, as well as the C/EBPalpha AD1/AD2 sequences, the latter of which are known to recruit the CREB binding protein (CBP) transcriptional coactivator. Consistent with these findings, adenovirus E1A-mediated inhibition of p300/CBP histone acetyltransferase activity abrogated C/EBPalpha-HNF6 transcriptional synergy in cotransfection assays. Co-immunoprecipitation assays with liver protein extracts demonstrate an association between the HNF6 and C/EBPalpha transcription factors and the CBP coactivator protein in vivo. Furthermore, chromatin immunoprecipitation assays with hepatoma cells demonstrated that increased levels of both C/EBPalpha and HNF6 proteins were required to stimulate association of these transcription factors and the CBP coactivator protein with the endogenous mouse Foxa2 promoter region. In conclusion, formation of the C/EBPalpha-HNF6 protein complex stimulates recruitment of the CBP coactivator protein for expression of Foxa2, a transcription factor critical for regulating expression of hepatic gluconeogenic genes during fasting.

Indexed as

Amino Acid SequenceAnimalsCCAAT-Enhancer-Binding Protein-alphaCell Line, TumorChromatin ImmunoprecipitationCREB-Binding ProteinHepatocyte Nuclear Factor 3-betaHepatocyte Nuclear Factor 6HumansMiceMultiprotein ComplexesPromoter Regions, GeneticTranscription, GeneticTransfectionCCAAT-Enhancer-Binding Protein-alphaCREB-Binding ProteinFOXA2 protein, humanHepatocyte Nuclear Factor 3-betaHepatocyte Nuclear Factor 6Multiprotein Complexes

Identifiers

PMID16440369
PMCPMC1360165
OpenAlexW2115829221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.