Evidence map›Paper›PMID 16439563›Full record

ArticleJournal of virology2006

Deacetylation of the herpes simplex virus type 1 latency-associated transcript (LAT) enhancer and a decrease in LAT abundance precede an increase in ICP0 transcriptional permissiveness at early times postexplant.

Antonio L Amelio, Nicole V Giordani, Nicole J Kubat, Jerome E O'neil, David C Bloom

Abstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Herpesvirus latency.The Journal of clinical investigation · 2020
    Review
  14. Herpesviral Latency-Common Themes.Pathogens (Basel, Switzerland) · 2020
    Review
  15. Article
  16. Article
  17. [Mechanisms of herpes simplex virus latency and reactivation].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2019
    Review
  18. Review
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Antonio L AmelioDepartment of Molecular Genetics and Microbiology, Box 100266, University of Florida College of Medicine, Gainesville, FL 32610-0266, USA.
Nicole V Giordani
Nicole J Kubat
Jerome E O'neil
David C Bloom

Funding

Molecular Genetics of HSV ReactivationR01AI048633 · NIAID · UNIVERSITY OF FLORIDA · PI BLOOM, DAVID C. · 2001 to 2023
$7.2M
BASIC MICROBIOLOGY &INFECTIOUS DISEASEST32AI007110 · NIAID · UNIVERSITY OF FLORIDA · PI Stephanie M Karst · 1985 to 2026
$4.3M
NIAID NIH HHS AI07110NIAID NIH HHS AI48633NIAID NIH HHS R01 AI048633NIAID NIH HHS T32 AI007110
6 · The paper itself

Abstract

Only the latency-associated transcript (LAT) of the herpes simplex virus type 1 (HSV-1) genome is transcribed during latency, while the lytic genes are suppressed, possibly by LAT antisense mechanisms and/or chromatin modifications. In the present study, latently infected dorsal root ganglia were explanted to assess both relative levels of LAT and histone H3 (K9, K14) acetylation of the LAT locus and ICP0 promoter at early times postexplant. We observed that a decrease in both LAT enhancer histone H3 (K9, K14) acetylation and LAT RNA abundance occurs prior to an increase in acetylation, or transcriptional permissiveness, at the ICP0 promoter.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, ViralAcetylationAnimalsFemaleGanglia, SpinalHerpesvirus 1, HumanHistonesImmediate-Early ProteinsMicePromoter Regions, GeneticRNA, UntranslatedRNA, ViralTranscription, GeneticUbiquitin-Protein LigasesVirus LatencyHistonesImmediate-Early ProteinsRNA, UntranslatedRNA, ViralUbiquitin-Protein LigasesVmw110 protein, Human herpesvirus 1

Identifiers

PMID16439563
PMCPMC1367155

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.