Evidence map›Paper›PMID 16439538›Full record

ArticleJournal of virology2006

Functional analysis of hepatitis C virus envelope proteins, using a cell-cell fusion assay.

Mariko Kobayashi, Michael C Bennett, Theodore Bercot, Ila R Singh

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Tumor Microenvironment and Cell Fusion.BioMed research international · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mariko KobayashiDepartment of Pathology, Columbia University Medical Center, 630 West 168th St., New York, NY 10032, USA.
Michael C Bennett
Theodore Bercot
Ila R Singh
Columbia University Irving Medical Center · US

Funding

The role of XMRV, a newly discovered human retrovirus, in cancer pathogenesisR01CA149719 · NCI · UNIVERSITY OF UTAH · PI SINGH, ILA R · 2010 to 2014
$1.5M
A novel approach to study hepatitis C virus entryR21DK062235 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SINGH, ILA R · 2002 to 2003
$322k
NCI NIH HHS R01 CA149719NIDDK NIH HHS R21DK062235
6 · The paper itself

Abstract

Hepatitis C virus (HCV) envelope proteins mediate the entry of virus into cells by binding to cellular receptors, resulting in fusion of the viral membrane with the host cell membrane and permitting the viral genome to enter the cytoplasm. We report the development of a robust and reproducible cell-cell fusion assay using envelope proteins from commonly occurring genotypes of HCV. The assay scored HCV envelope protein-mediated fusion by the production of fluorescent green syncytia and allowed us to elucidate many aspects of HCV fusion, including the pH of fusion, cell types that permit viral entry, and the conformation of envelope proteins essential for fusion. We found that fusion could be specifically inhibited by anti-HCV antibodies and by at least one peptide. We also generated a number of insertional mutations in the envelope proteins and tested nine of these using the fusion assay. We demonstrate that this fusion assay is a powerful tool for understanding the mechanism of HCV-mediated fusion, elucidating mutant function, and testing antiviral agents.

Indexed as

Antiviral AgentsCell FusionCell LineFluorescent Antibody Technique, IndirectGenes, ReporterGreen Fluorescent ProteinsHepacivirusHumansHydrogen-Ion ConcentrationMicroscopy, FluorescenceMutationProtein ConformationViral Envelope ProteinsAntiviral Agentsgreen fluorescent protein, Aequorea victoriaGreen Fluorescent ProteinsViral Envelope Proteins

Identifiers

PMID16439538
PMCPMC1367170
OpenAlexW2166807480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.