Evidence map›Paper›PMID 16433631›Full record

ArticleThe Biochemical journal2006

Homocysteine- and cysteine-mediated growth defect is not associated with induction of oxidative stress response genes in yeast.

Arun Kumar, Lijo John, Md Mahmood Alam, Ankit Gupta, Gayatri Sharma, Beena Pillai, Shantanu Sengupta

Open access · greenAbstract readComparative Study
In one paragraph

Article in The Biochemical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Cysteine protected cells from HWorld journal of microbiology & biotechnology · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. BioMed research international · 2020
    Article
  9. Article
  10. BioMed research international · 2019
    Article
  11. Engineering the YeastFrontiers in bioengineering and biotechnology · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Arun KumarInstitute of Genomics and Integrative Biology, Mall Road, Delhi-110007, India.
Lijo John
Md Mahmood Alam
Ankit Gupta
Gayatri Sharma
Beena Pillai
Shantanu Sengupta
Institute of Genomics and Integrative Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intracellular thiols like cysteine, homocysteine and glutathione play a critical role in the regulation of important cellular processes. Alteration of intracellular thiol concentration results in many diseased states; for instance, elevated levels of homocysteine are considered to be an independent risk factor for cardiovascular disease. Yeast has proved to be an excellent model system for studying many human diseases since it carries homologues of nearly 40% of human disease genes and many fundamental pathways are highly conserved between the two organisms. In the present study, we demonstrate that cysteine and homocysteine, but not glutathione, inhibit yeast growth in a concentration-dependent manner. Using deletion strains (str2Delta and str4Delta) we show that cysteine and homocysteine independently inhibit yeast growth. Transcriptional profiling of yeast treated with cysteine and homocysteine revealed that genes coding for antioxidant enzymes like glutathione peroxidase, catalase and superoxide dismutase were down-regulated. Furthermore, transcriptional response to homocysteine did not show any similarity to the response to H2O2. We also failed to detect induction of reactive oxygen species in homocysteine- and cysteine-treated cells, using fluorogenic probes. These results indicate that homocysteine- and cysteine-induced growth defect is not due to the oxidative stress. However, we found an increase in the expression of KAR2 (karyogamy 2) gene, a well-known marker of ER (endoplasmic reticulum) stress and also observed HAC1 cleavage in homocysteine- and cysteinetreated cells, which indicates that homocysteine- and cysteine-mediated growth defect may probably be attributed to ER stress. Transcriptional profiling also revealed that genes involved in one-carbon metabolism, glycolysis and serine biosynthesis were up-regulated on exogenous addition of cysteine and homocysteine, suggesting that cells try to reduce the intracellular concentration of thiols by up-regulating the genes involved in their metabolism.

Indexed as

Basic-Leucine Zipper Transcription FactorsCulture Media, ConditionedCysteineFungal ProteinsGene Expression Regulation, FungalGlutathioneGlycolysisHomocysteineHSP70 Heat-Shock ProteinsMethionineOxidation-ReductionOxidative StressReactive Oxygen SpeciesRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsBasic-Leucine Zipper Transcription FactorsCulture Media, ConditionedCysteineFungal ProteinsGlutathioneHAC1 protein, S cerevisiaeHomocysteineHSP70 Heat-Shock ProteinsKAR2 protein, yeastMethionineReactive Oxygen SpeciesRepressor ProteinsSaccharomyces cerevisiae ProteinsSulfhydryl Compounds

Identifiers

PMID16433631
PMCPMC1449999
OpenAlexW2031491789

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.