Evidence map›Paper›PMID 16432237›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

Nuclear localization of the Saccharomyces cerevisiae ribonucleotide reductase small subunit requires a karyopherin and a WD40 repeat protein.

Zhen Zhang, Xiuxiang An, Kui Yang, Deborah L Perlstein, Leslie Hicks, Neil Kelleher, JoAnne Stubbe, Mingxia Huang

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 46 citations in OpenAlex.

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  12. Conserved electron donor complex Dre2-Tah18 is required for ribonucleotide reductase metallocofactor assembly and DNA synthesis.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Zhen ZhangDepartment of Biochemistry and Molecular Genetics, University of Colorado Health Sciences Center, Aurora, CO 80045, USA.
Xiuxiang An
Kui Yang
Deborah L Perlstein
Leslie Hicks
Neil Kelleher
JoAnne Stubbe
Mingxia Huang
University of Colorado Health · USUniversity of Illinois Urbana-Champaign · USMassachusetts Institute of Technology · US

Funding

Ribonucleotide Reductase: Structure and FunctionR01GM029595 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI STUBBE, JOANNE · 1985 to 2016
$6.9M
Mass Spectrometric Studies of Thiotemplate BiosynthesisR01GM067725 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KELLEHER, NEIL L · 2003 to 2013
$3.0M
Function and Regulation of DNA Damage Response GenesR01CA095207 · NCI · UNIVERSITY OF COLORADO DENVER · PI HUANG, MINGXIA · 2003 to 2007
$1.3M
MECHANISM OF DINUCLEAR FE-Y. FORMATION OF NDP REDUCTASER37GM029595 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI STUBBE, JOANNE · 1988 to 1997
–
NCI NIH HHS CA 095207NCI NIH HHS R01 CA095207NIGMS NIH HHS GM 029595NIGMS NIH HHS GM 067725NIGMS NIH HHS R01 GM029595NIGMS NIH HHS R01 GM067725
6 · The paper itself

Abstract

Ribonucleotide reductase (RNR) catalyzes the reduction of ribonucleotides to the corresponding deoxyribonucleotides and is an essential enzyme for DNA replication and repair. Cells have evolved intricate mechanisms to regulate RNR activity to ensure high fidelity of DNA replication during normal cell-cycle progression and of DNA repair upon genotoxic stress. The RNR holoenzyme is composed of a large subunit R1 (alpha, oligomeric state unknown) and a small subunit R2 (beta(2)). R1 binds substrates and allosteric effectors; R2 contains a diferric-tyrosyl radical [(Fe)(2)-Y.] cofactor that is required for catalysis. In Saccharomyces cerevisiae, R1 is predominantly localized in the cytoplasm, whereas R2, which is a heterodimer (betabeta'), is predominantly in the nucleus. When cells encounter DNA damage or stress during replication, betabeta' is redistributed from the nucleus to the cytoplasm in a checkpoint-dependent manner, resulting in the colocalization of R1 and R2. We have identified two proteins that have an important role in betabeta' nuclear localization: the importin beta homolog Kap122 and the WD40 repeat protein Wtm1. Deletion of either WTM1 or KAP122 leads to loss of betabeta' nuclear localization. Wtm1 and its paralog Wtm2 are both nuclear proteins that are in the same protein complex with betabeta'. Wtm1 also interacts with Kap122 in vivo and requires Kap122 for its nuclear localization. Our results suggest that Wtm1 acts either as an adaptor to facilitate nuclear import of betabeta' by Kap122 or as an anchor to retain betabeta' in the nucleus.

Indexed as

beta KaryopherinsCatalysisCell NucleusChromatin ImmunoprecipitationCytoplasmDimerizationDNA DamageDNA ReplicationElectrophoresis, Polyacrylamide GelFungal ProteinsGene DeletionGene Expression Regulation, FungalGenes, FungalGreen Fluorescent ProteinsKaryopherinsModels, Biologicalbeta KaryopherinsFungal ProteinsGreen Fluorescent ProteinsKAP122 protein, S cerevisiaeKaryopherinsRecombinant Fusion ProteinsRepressor ProteinsRibonucleotide ReductasesSaccharomyces cerevisiae ProteinsTranscription FactorsWtm1 protein, S cerevisiaeWtm2 protein, S cerevisiae

Identifiers

PMID16432237
PMCPMC1360584
OpenAlexW2066224031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.