Evidence map›Paper›PMID 16432220›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2006

A unique role of the DNA fragmentation factor in maintaining genomic stability.

Bin Yan, Huili Wang, Yuanlin Peng, Ye Hu, He Wang, Xiuwu Zhang, Qi Chen, Joel S Bedford, Mark W Dewhirst, Chuan-Yuan Li

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. The role of the DFF40/CAD endonuclease in genomic stability.Apoptosis : an international journal on programmed cell death · 2021
    Review
  11. Dynamics and fragmentation of small inextensible fibres in turbulence.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2020
    Article
  12. Dnases in health and disease.Developmental biology · 2017
    Review
  13. Article
  14. Article
  15. DNA degradation and its defects.Cold Spring Harbor perspectives in biology · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Bin YanDepartments of Radiation Oncology and Pathology, Duke University Medical Center, Durham, NC 27710, USA.
Huili Wang
Yuanlin Peng
Ye Hu
He Wang
Xiuwu Zhang
Qi Chen
Joel S Bedford
Mark W Dewhirst
Chuan-Yuan Li
Duke Medical Center · USSichuan University · CNStanford University · USColorado State University · USDuke University Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA fragmentation is a hallmark of apoptosis (programmed cell death). However, the biological function of apoptotic DNA fragmentation remains unclear. Here, we show that DNA fragmentation factor plays an important role for maintaining genomic stability. Inhibition or loss of the DNA fragmentation factor (DFF)/caspase-activated DNase (CAD), whose nuclease activity is responsible for digesting genomic DNA during apoptosis, led to significant increases in spontaneous or induced gene mutations, gene amplifications, and chromosomal instability in primary mouse cells and transformed human cell lines. The mechanism underlying genetic instability in DFF/CAD-deficient cells, at least in part, involves a small but significant elevation in the survival of cells exposed to ionizing radiation, suggesting that apoptotic DNA fragmentation factor contributes to genomic stability by ensuring the removal of cells that have suffered DNA damage. In support of this hypothesis are the observations of increased cellular transformation of mouse embryonic cells from the DFF/CAD-null mice and significantly enhanced susceptibility to radiation-induced carcinogenesis in these mice. These data, in combination with published reports on the existence of tumor-specific gene mutations/deletions in the DFF/CAD genes in human cancer samples, suggest that apoptotic DNA fragmentation factor is required for the maintenance of genetic stability and may play a role in tumor suppression.

Indexed as

DNA FragmentationGenomeAnimalsApoptosisApoptosis Regulatory ProteinsCell LineCell Line, TumorCells, CulturedCell Transformation, NeoplasticChromosomesDeoxyribonucleasesDose-Response Relationship, RadiationFibroblastsGene Expression RegulationHumansMiceApoptosis Regulatory Proteinscaspase-activated deoxyribonucleasecaspase-activated DNase inhibitorDeoxyribonucleases

Identifiers

PMID16432220
PMCPMC1360538
OpenAlexW2130102910

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.